ANCOM Volcano Plot


ANCOM statistical results

W
Leptotrichia sp. HMT417 (SP185) 116
Neisseria flava (SP53) 115
Streptococcus mitis (SP249) 112
Streptococcus multispecies_spp29_2 (SPP29) 111
Aggregatibacter segnis (SP111) 108
Veillonella multispecies_spp25_2 (SPP25) 108
Klebsiella pneumoniae (SP63) 107
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 104
Schaalia odontolytica (SP19) 102
Neisseria sicca (SP614) 99
Porphyromonas pasteri (SP34) 99
Streptococcus australis (SP17) 98
Eikenella corrodens (SP104) 98
Leptotrichia sp. HMT215 (SP40) 98
Streptococcus parasanguinis_clade_411 (SP88) 97
Oribacterium sinus (SP123) 97
Neisseria elongata (SP145) 95
Catonella morbi (SP58) 95
Prevotella pallens (SP76) 94
Veillonella parvula (SP2) 94
Streptococcus sp. HMT066 (SP246) 94
Neisseria subflava (SP200) 92
Alloprevotella sp. HMT308 (SP52) 91
Veillonella tobetsuensis (SP107) 91
Campylobacter concisus_nov_96.963% (SPN15) 90
Haemophilus parainfluenzae (SP14) 90
Neisseria perflava (SP94) 89
Streptococcus chosunense (SP182) 88
Aggregatibacter sp. HMT458 (SP136) 88
Oribacterium multispecies_spp10_2 (SPP10) 88
Veillonella multispecies_spp6_3 (SPP6) 87
Actinomyces sp. HMT169 (SP95) 87
Streptococcus downii (SP70) 87
Prevotella melaninogenica (SP120) 87
Aggregatibacter sp. HMT513 (SP252) 86
Veillonella dispar (SP3) 86
Streptococcus sp. HMT057 (SP103) 86
Streptococcus infantis_clade_431 (SP148) 86
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Baseline +PMA Saliva +PMA Saliva +PMA Saliva +PMA Saliva +PMA Saliva +PMA
Leptotrichia sp. HMT417 (SP185) 1.0 1.00 1.0 1.00 1.0 589.0 671.25 800.0 951.75 1364.0
Neisseria flava (SP53) 4836.0 7659.25 9731.0 13893.25 25086.0 126.0 209.75 292.5 358.00 384.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 1.00 1.0 419.0 515.00 587.0 625.00 860.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.00 1.0 1.00 10.0 546.0 577.00 789.0 988.50 1272.0
Aggregatibacter segnis (SP111) 247.0 507.50 579.0 959.25 2236.0 10.0 23.50 41.0 107.75 171.0
Veillonella multispecies_spp25_2 (SPP25) 2338.0 4694.00 7918.5 11432.00 14514.0 288.0 423.75 489.5 572.50 715.0
Klebsiella pneumoniae (SP63) 1.0 20.00 77.5 348.25 1996.0 1.0 1.00 1.0 1.50 4.0
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 1.0 1.00 1.0 1.00 1.0 102.0 236.25 397.0 657.50 980.0
Schaalia odontolytica (SP19) 1.0 1.00 1.0 6.00 14.0 686.0 836.00 946.5 1011.00 1227.0
Neisseria sicca (SP614) 1.0 54.75 134.0 207.75 1177.0 1.0 1.00 8.0 17.50 37.0
Porphyromonas pasteri (SP34) 412.0 823.75 1057.0 1681.75 2299.0 3980.0 4582.75 5330.0 6651.50 7759.0
Streptococcus australis (SP17) 1.0 1.00 1.0 1.00 1.0 149.0 227.25 260.0 364.75 453.0
Eikenella corrodens (SP104) 93.0 150.00 193.0 322.25 477.0 21.0 25.75 50.0 70.50 139.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.00 1.0 1.00 4.0 176.0 223.50 317.0 450.50 605.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 1.0 1.00 1.0 193.0 213.25 242.0 287.75 326.0
Oribacterium sinus (SP123) 1.0 1.00 1.0 1.00 1.0 152.0 184.75 242.0 291.50 302.0
Neisseria elongata (SP145) 35.0 142.50 1162.0 2739.00 4223.0 53.0 57.75 72.5 108.50 165.0
Catonella morbi (SP58) 1.0 1.00 1.0 1.00 1.0 128.0 148.25 157.5 173.00 203.0
Prevotella pallens (SP76) 1.0 1.00 1.0 11.50 23.0 409.0 702.25 936.0 1227.00 1395.0
Veillonella parvula (SP2) 630.0 1224.50 1928.5 2251.00 3042.0 176.0 373.75 428.0 503.75 566.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 1.0 1.00 1.0 101.0 133.00 149.5 177.50 214.0
Neisseria subflava (SP200) 321.0 582.25 808.0 1028.50 1632.0 115.0 147.25 279.0 468.75 509.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 1.0 2.00 19.0 377.0 457.25 525.0 581.75 761.0
Veillonella tobetsuensis (SP107) 76.0 97.00 126.5 137.00 205.0 237.0 262.75 275.0 303.25 385.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 31.75 280.0 706.25 1159.0 13.0 16.00 19.0 26.25 36.0
Haemophilus parainfluenzae (SP14) 6547.0 9704.75 13540.5 15763.75 27948.0 3784.0 4235.00 4580.0 5103.75 6059.0
Neisseria perflava (SP94) 597.0 892.00 1525.5 2945.50 9141.0 2974.0 3660.75 4623.5 5999.25 7222.0
Streptococcus chosunense (SP182) 1.0 1.00 1.0 1.00 1.0 81.0 102.75 124.0 145.50 157.0
Aggregatibacter sp. HMT458 (SP136) 15.0 42.00 73.0 164.50 444.0 15.0 24.00 28.5 31.00 56.0
Oribacterium multispecies_spp10_2 (SPP10) 1.0 1.00 1.0 1.00 1.0 77.0 103.25 121.0 144.75 167.0
Veillonella multispecies_spp6_3 (SPP6) 352.0 486.25 564.0 650.75 1607.0 250.0 374.50 483.0 653.50 715.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 1.00 1.0 40.0 69.75 88.5 108.25 119.0
Streptococcus downii (SP70) 1.0 1.00 1.0 1.00 7.0 122.0 179.75 210.0 229.50 262.0
Prevotella melaninogenica (SP120) 64.0 169.50 388.0 1018.25 1229.0 3490.0 4396.75 5387.0 7140.75 7876.0
Aggregatibacter sp. HMT513 (SP252) 1.0 76.25 121.0 161.00 318.0 1.0 16.75 21.0 25.25 75.0
Veillonella dispar (SP3) 186.0 415.50 503.0 619.50 1607.0 331.0 466.25 607.5 887.75 913.0
Streptococcus sp. HMT057 (SP103) 1.0 1.00 1.0 1.00 1.0 3.0 15.00 18.0 23.25 28.0
Streptococcus infantis_clade_431 (SP148) 1.0 1.00 1.0 1.00 19.0 230.0 294.75 340.5 368.75 439.0
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