QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Leptotrichia sp. HMT417 (SP185) 103
Streptococcus mitis (SP249) 101
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 99
Aggregatibacter segnis (SP111) 98
Neisseria flava (SP53) 98
Eikenella corrodens (SP104) 94
Streptococcus multispecies_spp29_2 (SPP29) 92
Veillonella multispecies_spp25_2 (SPP25) 91
Streptococcus parasanguinis_clade_411 (SP88) 89
Neisseria subflava (SP200) 89
Aggregatibacter sp. HMT513 (SP252) 87
Neisseria sicca (SP614) 87
Haemophilus parainfluenzae (SP14) 87
Streptococcus australis (SP17) 84
Oribacterium sinus (SP123) 82
Veillonella parvula (SP2) 81
Schaalia sp. HMT172 (SP57) 79
Streptococcus sp. HMT066 (SP246) 79
Streptococcus chosunense (SP182) 78
Veillonella dispar (SP3) 78
Lancefieldella parvula (SP174) 78
Catonella morbi (SP58) 77
Stomatobaculum sp. HMT097 (SP5) 77
Actinomyces sp. HMT169 (SP95) 77
Klebsiella pneumoniae (SP63) 76
Actinomyces graevenitzii (SP42) 76
Streptococcus downii (SP70) 76
Alloprevotella sp. HMT473 nov_97.347% (SPN70) 76
Veillonella multispecies_spp6_3 (SPP6) 76
Phyllobacterium myrsinacearum (SP44) 75
Leptotrichia sp. HMT215 (SP40) 75
Mycolicibacterium multispecies_spp31_2 (SPP31) 75
Porphyromonas catoniae (SP15) 75
Alloprevotella sp. HMT308 (SP52) 74
Agrobacterium tumefaciens (SP369) 74
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 74
Prevotella aurantiaca (SP288) 74
Veillonella rogosae (SP90) 74
Oribacterium multispecies_spp10_2 (SPP10) 74
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline P2 +PMA Baseline P2 +PMA Baseline P2 +PMA Baseline P2 +PMA Baseline P2 +PMA Saliva P2 +PMA Saliva P2 +PMA Saliva P2 +PMA Saliva P2 +PMA Saliva P2 +PMA
Leptotrichia sp. HMT417 (SP185) 1.0 1.00 1.0 1.00 1.0 636.0 702.50 795.5 867.50 1364.0
Streptococcus mitis (SP249) 1.0 1.00 1.0 1.00 1.0 419.0 543.00 587.0 602.50 606.0
Lachnospiraceae_[G-2] bacterium HMT096 (SP27) 1.0 1.00 1.0 1.00 1.0 258.0 328.50 467.0 640.00 956.0
Aggregatibacter segnis (SP111) 247.0 436.75 493.0 534.50 769.0 10.0 17.50 22.0 27.25 30.0
Neisseria flava (SP53) 5948.0 7168.00 9158.5 10765.25 19952.0 290.0 307.75 351.0 362.00 366.0
Eikenella corrodens (SP104) 93.0 149.00 206.5 338.00 477.0 21.0 25.00 25.5 31.25 41.0
Streptococcus multispecies_spp29_2 (SPP29) 1.0 1.00 1.0 1.00 10.0 546.0 556.75 572.0 586.50 708.0
Veillonella multispecies_spp25_2 (SPP25) 2998.0 5337.00 8157.0 10897.25 14450.0 478.0 502.75 559.0 575.50 603.0
Streptococcus parasanguinis_clade_411 (SP88) 1.0 1.00 1.0 1.00 1.0 217.0 253.50 296.5 314.00 326.0
Neisseria subflava (SP200) 321.0 460.25 625.0 1011.75 1632.0 115.0 125.50 145.5 164.00 173.0
Aggregatibacter sp. HMT513 (SP252) 35.0 101.50 139.0 169.25 318.0 1.0 6.00 23.0 25.75 32.0
Neisseria sicca (SP614) 1.0 97.75 156.0 249.25 1177.0 1.0 1.00 1.0 1.00 1.0
Haemophilus parainfluenzae (SP14) 10286.0 15059.00 15814.5 19025.75 27948.0 3784.0 4224.75 4503.5 4594.00 5078.0
Streptococcus australis (SP17) 1.0 1.00 1.0 1.00 1.0 149.0 179.25 226.5 252.75 263.0
Oribacterium sinus (SP123) 1.0 1.00 1.0 1.00 1.0 161.0 172.25 198.5 224.75 293.0
Veillonella parvula (SP2) 850.0 1736.25 1959.0 2089.25 2686.0 399.0 454.50 506.5 536.00 566.0
Schaalia sp. HMT172 (SP57) 1.0 1.00 1.0 1.00 1.0 111.0 121.75 153.0 170.75 174.0
Streptococcus sp. HMT066 (SP246) 1.0 1.00 1.0 1.00 1.0 127.0 152.25 169.5 184.50 214.0
Streptococcus chosunense (SP182) 1.0 1.00 1.0 1.00 1.0 104.0 126.75 144.5 146.50 153.0
Veillonella dispar (SP3) 433.0 554.50 637.0 1046.75 1607.0 699.0 877.00 892.5 903.50 913.0
Lancefieldella parvula (SP174) 1.0 1.00 1.0 1.00 1.0 103.0 129.00 137.5 152.75 157.0
Catonella morbi (SP58) 1.0 1.00 1.0 1.00 1.0 138.0 155.00 167.0 184.25 203.0
Stomatobaculum sp. HMT097 (SP5) 1.0 1.00 1.0 1.00 1.0 36.0 43.25 54.0 66.25 80.0
Actinomyces sp. HMT169 (SP95) 1.0 1.00 1.0 1.00 1.0 54.0 93.25 101.5 112.00 119.0
Klebsiella pneumoniae (SP63) 1.0 18.50 75.5 337.75 728.0 1.0 1.00 1.0 2.50 4.0
Actinomyces graevenitzii (SP42) 1.0 1.00 1.0 1.00 1.0 81.0 97.00 114.0 119.00 142.0
Streptococcus downii (SP70) 1.0 1.00 1.0 1.00 4.0 182.0 208.00 216.0 227.75 248.0
Alloprevotella sp. HMT473 nov_97.347% (SPN70) 1.0 1.00 1.0 1.00 10.0 463.0 490.00 518.5 567.25 578.0
Veillonella multispecies_spp6_3 (SPP6) 390.0 486.00 595.5 929.75 1607.0 531.0 600.50 654.0 669.25 715.0
Phyllobacterium myrsinacearum (SP44) 1.0 1.00 1.0 1.00 4.0 1.0 1.00 1.0 1.00 1.0
Leptotrichia sp. HMT215 (SP40) 1.0 1.00 1.0 1.00 4.0 195.0 218.50 235.0 268.75 357.0
Mycolicibacterium multispecies_spp31_2 (SPP31) 1.0 1.00 1.0 1.00 5.0 1.0 1.00 1.0 1.00 1.0
Porphyromonas catoniae (SP15) 21.0 56.25 82.0 153.00 262.0 40.0 45.25 46.5 50.75 52.0
Alloprevotella sp. HMT308 (SP52) 1.0 1.00 1.0 2.50 13.0 499.0 550.75 589.5 664.25 761.0
Agrobacterium tumefaciens (SP369) 1.0 1.00 1.0 1.00 5.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP29) 1.0 9.75 16.5 23.75 31.0 1.0 1.00 1.0 1.00 14.0
Prevotella aurantiaca (SP288) 1.0 1.00 1.0 1.00 5.0 220.0 231.50 235.5 247.00 253.0
Veillonella rogosae (SP90) 1862.0 2849.00 3588.5 7116.75 10720.0 2998.0 3464.00 3552.0 3649.75 4003.0
Oribacterium multispecies_spp10_2 (SPP10) 1.0 1.00 1.0 1.00 1.0 92.0 108.25 127.0 143.50 167.0
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