Paired difference tests
Metric Difference in shannon_entropy (Day 29 - Day 1)
Group column Treatment
State column Day
State 1 1
State 2 29
Individual ID column Subject_ID
Parametric False
Replicates handling random

Pairwise difference boxplot

Pairwise difference tests

W (wilcoxon signed-rank test) P-value FDR P-value
Group
MTB 149.0 3.120213e-03 3.120213e-03
SIM 3.0 2.910383e-10 5.820766e-10

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Multiple group tests

H P value
Kruskal Wallis test 20.325926 0.000007

Pairwise group comparison tests

Mann-Whitney U P-value FDR P-value
Group A Group B
SIM MTB 238.0 0.000007 0.000007

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