#Species	F4401.S01	F4401.S02	F4401.S03	F4401.S04	F4401.S05	F4401.S06	F4401.S07	F4401.S08	F4401.S09	F4401.S10	F4401.S11	F4401.S12	F4401.S13	F4401.S14	F4401.S15	F4401.S16	F4401.S17	F4401.S18	F4401.S19	F4401.S20	F4401.S21	F4401.S22	F4401.S23	F4401.S24	F4401.S25	F4401.S26	F4401.S27	F4401.S28	F4401.S29	F4401.S30	F4401.S31	F4401.S32	F4401.S33	F4401.S34	F4401.S35	F4401.S36	F4401.S37	F4401.S38	F4401.S39	F4401.S40	F4401.S41	F4401.S42	F4401.S43	F4401.S44	F4401.S45	F4401.S46	F4401.S47
Bacteroides thetaiotaomicron (SP1)	327	67	3087	2183	2774	13666	691	2758	909	627	137	185	509	109	0	112	588	374	148	609	1069	1735	0	0	0	0	87	0	69	0	82	0	0	0	0	0	0	0	0	0	0	764	2336	197	635	26	341
Acutalibacter muris (SP10)	0	0	0	0	0	0	75	0	0	65	0	0	101	138	0	280	0	0	151	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Sutterella sp._str._cont1.66 (SP11)	0	0	0	0	0	0	319	408	271	300	0	232	287	138	0	302	272	75	113	173	211	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Propionibacterium acnes (SP14)	22	0	0	0	19	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	101	270	113	115	325	139	94	125	48	8	307	153	0	0	80	0	151	207	0	0	35	0	0	0
Akkermansia muciniphila (SP15)	16	24	0	0	0	0	1018	1587	166	143	0	774	538	468	0	168	371	1415	61	72	312	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0	0	0
Corynebacterium mastitidis (SP18)	0	0	793	475	116	75	0	0	0	0	872	0	0	0	0	0	0	0	0	0	0	81	0	0	0	0	0	0	0	0	0	0	153	0	0	0	0	0	0	0	0	62	0	7856	160	21	0
Streptococcus danieliae (SP2)	64	0	211	532	240	171	0	0	0	0	58	0	0	0	0	0	0	0	0	0	0	352	0	0	0	0	0	0	220	0	0	0	11	0	0	0	0	0	0	0	0	340	282	144	139	138	251
Staphylococcus saprophyticus (SP22)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1127	0	0	0	0	0	0	0	0	0	0
Staphylococcus cohnii (SP26)	284	0	0	0	0	178	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	92	101	0	0	0	0	0	58	0	0	33	0	0	215	121	0	32	0	0
Acinetobacter johnsonii (SP3)	0	0	14	15	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	103	0	0	53	38	101	54	0	0	0	0	0	67	27	41	0	176	0	0	0	0	0	0	9	0
Lactobacillus murinus (SP4)	150	201	0	17	0	0	0	0	418	338	97	947	1162	158	1611	621	574	435	0	163	520	198	0	0	0	0	0	0	303	147	0	0	40	0	0	24	0	0	0	51	69	489	61	1702	210	0	0
Streptococcus thoraltensis (SP5)	29604	22073	12895	10122	22052	22409	0	0	0	0	5908	0	0	0	0	0	0	0	0	0	0	17136	0	0	0	0	0	192	133	0	0	0	8105	0	0	0	1939	0	0	0	0	13565	16240	1555	6538	3350	8773
Bifidobacterium pseudolongum (SP6)	0	0	88	0	0	0	0	100	32	48	0	25	25	6	0	0	88	0	0	24	18	0	0	0	0	0	0	0	0	54	0	0	0	0	0	0	0	0	67	0	0	0	0	0	0	0	0
Escherichia coli (SP7)	452	3307	3871	0	3700	0	0	0	0	0	0	0	0	0	0	0	0	3640	743	3307	2977	0	219	114	0	99	0	0	152	0	32	0	0	0	84	0	65	0	0	0	49	0	0	0	0	679	5295
Bacteroidetes_[G-7] bacterium HMT911 nov_85.910% (SPN11)	0	8	0	0	0	0	569	483	483	397	0	573	398	370	0	361	337	224	406	470	563	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	55	0	0	0	0	32	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.854% (SPN112)	0	0	0	0	0	0	0	0	0	0	0	0	242	135	0	0	127	132	72	150	175	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Erysipelatoclostridium sp._str._HGF2_nov_88.971% (SPN120)	0	0	0	0	0	0	81	28	135	14	0	195	32	0	0	239	50	0	90	0	16	0	0	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.047% (SPN130)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	498	0	265	135	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	59	0	0	3	0	0	0	0
Barnesiella viscericola_nov_83.364% (SPN137)	0	0	0	0	0	0	100	103	134	118	0	0	91	98	0	0	0	0	36	118	142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.660% (SPN140)	0	0	0	0	0	0	0	0	0	0	0	62	106	69	0	409	76	0	87	0	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	69	0	0	0	0	0	0	0
Lacnoclostridium hathewayi_nov_94.212% (SPN141)	0	0	0	0	0	0	0	0	0	0	0	75	33	175	0	170	0	0	375	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	0	0	0
Faecalibaculum rodentium_nov_84.906% (SPN142)	0	0	0	0	0	0	0	0	0	0	0	0	66	19	0	0	256	21	61	83	52	0	0	0	0	74	0	0	0	0	0	87	0	0	0	0	0	0	0	101	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_87.184% (SPN143)	0	0	0	0	0	0	0	0	0	0	0	98	105	71	0	55	145	5	65	85	101	0	0	0	0	0	0	74	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.133% (SPN144)	0	0	0	0	0	0	109	171	86	60	0	68	156	79	0	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Acetivibrio cellulolyticus_nov_84.058% (SPN145)	0	0	0	0	0	0	164	0	0	0	0	57	147	88	0	119	50	0	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_78.835% (SPN146)	0	0	0	0	0	0	33	46	47	0	0	0	69	72	0	106	67	41	54	70	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Eubacterium eligens_nov_87.572% (SPN148)	0	0	0	0	0	0	0	0	91	182	0	0	0	11	0	162	0	0	18	19	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_83.268% (SPN159)	16	0	0	0	0	0	2231	2541	4561	3563	0	4310	4395	2652	0	1954	2560	400	2047	3455	2817	0	0	104	0	0	0	0	93	0	0	0	0	74	66	0	35	0	0	33	0	0	0	72	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.352% (SPN186)	0	0	0	0	0	0	0	0	0	0	0	814	987	875	18	1106	1644	44	1474	1261	1580	0	0	0	0	0	0	0	0	0	56	0	0	0	25	0	0	0	18	39	0	0	0	28	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.742% (SPN2)	0	0	0	0	0	0	204	122	246	251	0	246	135	151	0	149	298	105	290	63	228	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Gabonia massiliensis_nov_86.704% (SPN205)	0	0	0	0	0	0	641	407	492	435	0	403	378	204	0	570	281	228	301	313	330	0	0	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.127% (SPN223)	0	0	0	0	0	0	364	332	371	367	0	187	328	250	0	305	381	136	362	334	183	0	0	0	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	62	0	0	0	0	0	0
Alistipes senegalensis_nov_93.846% (SPN234)	0	0	0	0	0	0	0	0	0	0	0	329	50	768	0	1590	245	75	314	71	189	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.127% (SPN244)	0	0	0	0	0	0	284	472	400	314	0	103	159	46	0	76	179	0	107	213	213	0	0	93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	108	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.853% (SPN252)	0	0	0	0	0	0	268	426	490	403	0	113	72	58	0	67	221	0	84	225	198	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.940% (SPN260)	0	0	0	0	0	0	568	513	489	472	0	0	133	140	0	31	59	0	0	93	82	0	0	0	0	0	0	0	0	0	0	0	0	0	46	0	0	0	0	0	0	0	0	0	0	0	0
Turicibacter sanguinis_nov_95.833% (SPN31)	0	0	0	0	0	0	39	0	470	96	0	428	65	33	0	0	302	16	84	133	329	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0
Alistipes finegoldii_nov_93.690% (SPN40)	10	0	0	0	0	0	0	0	0	0	0	194	223	237	0	329	155	216	201	80	173	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_87.476% (SPN48)	0	0	0	0	0	0	197	331	177	37	0	204	198	87	0	41	102	0	0	134	107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Parabacteroides distasonis_nov_83.426% (SPN61)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1313	0	0	0	0	0	0	0	0	75	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.423% (SPN69)	0	0	0	0	0	0	147	152	0	0	0	93	138	123	0	143	114	0	207	130	112	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Streptococcus acidominimus_nov_94.788% (SPN77)	0	17	2494	11076	0	0	0	0	0	0	10627	0	0	0	0	0	0	0	0	0	0	4231	0	72	0	0	0	0	232	0	0	0	10882	0	0	0	42	0	0	0	0	7355	6554	6885	13859	15765	2170
Hathewaya proteolytica_nov_83.768% (SPN83)	0	0	0	0	0	0	143	0	108	215	0	118	224	297	0	94	0	0	39	0	107	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Alistipes senegalensis_nov_94.073% (SPN90)	0	0	0	0	0	0	0	99	137	57	0	136	133	166	0	102	66	130	141	0	79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Allobaculum stercoricanis_nov_86.139% (SPN94)	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	201	729	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	161	0	0	0	16	0	0	0
Propionibacterium acnes (SPP1)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	70	0	100	89	113	85	23	140	0	65	0	137	0	0	0	38	0	0	0	0	0	0	0	0	0
multigenus multispecies_spp4_3 (SPP4)	191	1378	1718	0	1625	0	0	0	0	0	0	0	0	0	0	0	0	1565	360	1361	1272	0	144	0	0	42	103	77	0	0	0	44	0	0	0	0	0	0	0	226	0	0	0	0	0	302	2315
Clostridium glycyrrhizinilyticum (SPPN8)	0	0	0	0	0	0	43	0	0	0	0	37	0	88	0	524	0	0	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
