K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia.S_extructa 2.96655857643 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia 1.88562037457 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_ 2.6236372475 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_481 2.65538859905 - K_Bacteria.P_Proteobacteria 4.86567190857 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_elegans 3.00138479458 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_ 2.75005595246 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_anginosus 4.32901028644 - K_Bacteria.P_Chloroflexi 2.45901892833 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_mirabilis 3.90584437659 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_268 2.83440357625 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_ 2.58854327112 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales 4.2724714217 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_263 2.30866159782 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_262 2.77008909228 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_937 1.7273959788 - K_Archaea.P_Euryarchaeota.C_Methanobacteria.O_Methanobacteriales.F_Methanobacteriaceae.G_Methanobrevibacter 2.49905304854 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales 5.11819195203 Smoker_24_Weeks_P2 4.57868967207 0.0178121872311 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales 4.3684158137 Smoker_24_Weeks_P2 3.52068035336 0.00575020827707 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia.S_exigua 3.09104269531 Smoker_24_Weeks_P2 3.05484632622 0.00028415971956 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_.S_bacterium_HMT_081 1.71977927046 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda.S_periodontii 2.46541203734 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_longum 2.46766553002 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oris_nov_97_588 2.58405156934 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus 3.50703975856 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii_nov_96_016 2.83629766875 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_buccalis 3.58517056998 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_denitrificans 2.6423819112 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_365 2.64022038941 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii 3.44951498505 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium 3.27837259167 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_ 3.9234827336 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_957 2.78772884464 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_149 2.45857126442 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_178 3.39853963729 Smoker_24_Weeks_P2 3.1695204038 5.97215880466e-05 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae 3.46395255748 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_513 2.78258435355 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_512 2.83533335854 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia 4.44644842167 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_448 4.62802272282 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_bacterium_HMT_103 2.53280202232 Smoker_24_Weeks_P2 3.51011444373 0.0181758608099 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella 3.3944915284 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_305_nov_93_898 1.81264338836 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae 3.22933222928 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum_nov_90_019 0.0 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium.S_sp__HMT_416 0.0 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria 4.41110514529 Smoker_24_Weeks_P2 3.82355325361 0.00152043931169 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia 4.11229448099 Smoker_24_Weeks_P2 3.5069865441 5.7478862432e-05 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae 4.44644842167 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix_nov_97_248 2.96396447765 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_geminatus 3.50703975856 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_ 2.84277523669 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sputigena 3.92212011856 Baseline_B_P2 3.4490830109 0.0211614710784 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mitis 4.69660673735 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis 3.41208476656 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp27_2 2.23022831184 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae 2.6236372475 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_dianae 2.97284013082 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus 3.53211055914 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum 3.93816243637 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter.S_massiliensis 2.94192567925 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_308 2.89656549392 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_tannerae 4.01489852104 Baseline_B_P2 3.55377425178 0.0151434433217 K_Bacteria.P_Synergistetes 3.74503082393 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_gingivalis 3.91588686877 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_medium 2.48243141656 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_parainfluenzae 4.45139799098 Smoker_24_Weeks_P2 4.06659011287 0.00110973630647 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus 1.86463467149 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multispecies_spp29_2 2.66993225896 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S_stomatis 2.24872569546 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus.S_salivarius 1.96181713401 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales 5.42934722578 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_loescheii_nov_96_768 2.7203097651 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_multispecies_spp24_2 2.5250115782 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300_nov_97_239 2.1620519977 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_rimae 3.77498798909 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 5.40041725715 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__dentisani_clade_058 2.90659617432 - K_Bacteria.P_Bacteroidota 3.35147427397 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus.S_sp__HMT_041 2.86691674254 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_denticola 3.42589165787 Baseline_B_P2 3.03777462765 0.042620845852 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_pasteri 3.40347919776 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_ 3.87842118853 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_sp__HMT_110 3.52583251246 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_rava_nov_97_244 2.52652777384 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_saburreum 3.70937002748 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_95_046 2.3171863258 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales 3.19469436225 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_hominis 3.18208322573 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sinus 3.01544168938 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga 4.33247002741 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_913 2.37523264735 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_912 2.41740820854 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_914 1.9456093556 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter.S__Eubacterium_yurii 2.90563329849 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_parvula 4.15652833222 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_286 3.17867577537 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_145 2.95255924818 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella 3.74533288469 Smoker_24_Weeks_P2 2.93129472148 0.0225640823974 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 4.19609049286 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_.S_bacterium_HMT_093 2.87913391532 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_345 2.53425919825 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_ 3.05264199948 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_sp__HMT_123 1.87468336322 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales 5.09048093453 Baseline_B_P2 4.33555279345 0.00153888678563 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_820 0.0 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium 3.74503082393 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_weissii_nov_94_220 2.8873112306 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_292 2.57479932141 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_96_324 2.52663657018 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_naeslundii_nov_97_422 3.73002652814 Smoker_24_Weeks_P2 3.44962523505 0.00028415971956 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Centipeda 2.46541203734 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_lingnae__Not_Validly_Published_ 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas 4.34945307357 Baseline_B_P2 3.7475290868 0.0249211517569 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales 4.44644842167 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_ 3.38786203538 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor 3.47854406076 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_.G_Mollicutes__G_1_ 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae 3.16059749866 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_.S_bacterium_HMT_274 3.9234827336 - K_Eukaryota.P_Streptophyta.C_Magnoliopsida 0.0 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_902 2.62934971 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sobrinus 3.28414161675 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_showae 3.28966402444 Smoker_24_Weeks_P2 3.0267813334 0.0445235009351 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 3.5657594896 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae 3.93753504146 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_505_nov_95_992 0.0 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_HMT_904 2.49472461212 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae__G_1_.S_bacterium_HMT_905 2.03328532945 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_ 2.96896168249 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 4.3896421852 Smoker_24_Weeks_P2 3.76012350741 0.00389267082375 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_concisus 3.3394608953 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_.S_bacterium_HMT_091 2.22001918344 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_ 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_vescum 2.93263312349 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma 3.19469436225 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_sp__HMT_807 4.05216453067 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_sp__HMT_183 3.84102154244 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_ 2.74937577361 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia 3.5657594896 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_johnsonii 3.74987340909 Smoker_24_Weeks_P2 3.4896828476 0.00977019771907 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales 3.22933222928 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_237 3.43731520208 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_234 2.75064155044 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales 3.6687739067 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_230 2.6314698286 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_231 2.87014546408 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium 2.85118135327 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_238 2.70766773287 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_loescheii 3.32539587463 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_rectus 1.4182940945 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia.S_catenaformis 3.12128354434 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_920 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_910 2.4036828643 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_odontolytica 3.4408742882 Smoker_24_Weeks_P2 3.05561280108 0.00710507710134 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_.S_bacterium_HMT_439 2.45901892833 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae 4.23580591264 Smoker_24_Weeks_P2 3.54004550845 0.000535171380447 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_.S__Eubacterium__nodatum 3.06630227057 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella 3.14646629227 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales 3.5657594896 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria 4.01057962902 Smoker_24_Weeks_P2 3.48129679025 0.00121476862523 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sputigena 3.40926664474 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_multispecies_sppn5_2_nov_94_839 2.54760626711 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 5.12369955305 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_bergeri 2.50936920695 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_892_nov_97_901 2.1070645343 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae 2.9187554121 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_wadei 4.10070735374 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_083 0.0 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_endodontalis 3.35445022823 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis 4.49282490043 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_bacilliformis 3.05679460129 Baseline_B_P2 2.89676090416 0.0327375055335 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_denticola 3.92336543386 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Bacteroidales__F_2_.G_Bacteroidales__G_2_ 3.9234827336 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_multispecies_spp26_2 2.47215652623 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Ligilactobacillus 1.96181713401 - K_Bacteria.P_Bacteroidota.C_Bacteroidia 3.35147427397 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_viscosus_nov_95_849 3.60208996328 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_317 4.00206004516 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_315 2.60709565819 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_314 3.09340855115 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_viscosus_nov_95_841 2.66277229385 Smoker_24_Weeks_P2 3.31622952772 0.00796670607721 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_perflava 2.0403834853 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_serpentiformis 2.65371982439 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_multispecies_spp13_2 4.62657965858 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas 4.32359295732 Baseline_B_P2 3.67944407818 0.0179826870782 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_ 3.85544512387 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_ 2.75005595246 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_949 1.97035133924 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae 3.3748354543 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_525 3.50521963502 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter 4.08723532125 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oralis 3.27882043404 - K_Eukaryota.P_Streptophyta 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_intermedia 3.88434378826 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_sanguinis 2.67266572775 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 4.51465213828 Smoker_24_Weeks_P2 4.08033094499 0.00499243009675 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_subsp__vincentii 3.72753474772 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_898 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_ 2.88964038146 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_458 3.32513633265 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 5.40041725715 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_segnis 3.05222712916 Smoker_24_Weeks_P2 3.07878700416 0.00796670607721 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Colibacter 2.94192567925 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_infelix 3.15170742312 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_360 3.2366466585 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_gracilis 3.98400318027 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae 2.86691674254 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_longum 3.44519660968 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis 3.79186771473 Smoker_24_Weeks_P2 3.25760277126 0.0162135327928 K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_morbillorum 3.76143083431 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales 3.3748354543 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi 2.6236372475 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae 4.08723532125 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae 4.28435110708 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_97_037 2.96424482408 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_.S_bacterium_HMT_500 2.39278979923 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284 1.90340625684 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum 3.35225863125 Smoker_24_Weeks_P2 2.9572590457 0.00810458296834 K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_cristatus 3.93946962597 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella 2.95763125155 Smoker_24_Weeks_P2 3.09144616679 0.00349222450655 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella 3.79697877165 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_ 3.34455596732 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_ 3.01138820101 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum 4.70225611767 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma.S_salivarium 2.47703761165 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_wadei_nov_97_395 2.47660711814 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_fusca 3.11559327893 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_270 2.58744364439 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_892 2.60617213098 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_maculosa 3.16133291265 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia 2.70548601369 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_168 2.26998702846 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis_nov_97_727 3.95743014105 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_5_.S__Eubacterium__saphenum 3.38786203538 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_155 3.00229497298 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia 5.11819195203 Smoker_24_Weeks_P2 4.57868967207 0.0178121872311 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus.S_sp__HMT_167 2.82723718663 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_150 3.16007627287 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_georgiae 2.63454780266 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_fastidiosum 3.38405869563 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus 4.45762040625 Smoker_24_Weeks_P2 4.0692051251 0.000918964588932 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_359 2.92586163352 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_170 3.64699563426 Smoker_24_Weeks_P2 3.11731875992 0.00487331080739 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_171 3.37975042358 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175 4.05113451948 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_ 0.0 - K_Bacteria.P_Fusobacteria.C_Fusobacteria 4.7670924625 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 2.70548601369 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_viscosus 3.00356381599 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Parascardovia 2.21859229669 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_constellatus 3.56077416322 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_1_.S_bacterium_HMT_075 2.88964038146 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_ 3.87842118853 - K_Bacteria 6.0 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales 2.32952772916 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium.S_acidifaciens 3.48857976625 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_melaninogenica 3.5744186635 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_916 2.06318210565 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii 4.31725315747 Smoker_24_Weeks_P2 3.7741931121 0.000327155777419 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_138 2.26334999107 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_134 2.98461790693 - K_Archaea 2.49905304854 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_136 2.31475644248 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137 2.93131906834 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales 4.23580591264 Smoker_24_Weeks_P2 3.54839089825 0.000535171380447 K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_sp__HMT_780 2.22095548102 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia 4.44644842167 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_146 2.45833434753 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_ 3.6388614866 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae__G_1_ 2.45901892833 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_micans 2.18198946382 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Slackia 3.09104269531 Smoker_24_Weeks_P2 3.08863705618 0.00028415971956 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium 2.32952772916 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_leadbetteri 3.64494519724 - K_Archaea.P_Euryarchaeota.C_Methanobacteria.O_Methanobacteriales 2.49905304854 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_96_402 3.31599347759 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300_nov_97_638 2.85503578382 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_sp__HMT_496 2.66056910534 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Marseilla 3.12525191014 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_oralis 3.73455762366 Smoker_24_Weeks_P2 2.9285225159 0.0174438436425 K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter 3.60478053681 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_massiliensis 2.26084336828 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_timidum 3.57686099706 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora 2.72173271761 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_9_.S__Eubacterium__brachy 3.85544512387 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_rava 3.27490462949 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium 3.3748354543 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_parasanguinis_clade_411 4.17024343135 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_927_nov_91_535 2.8510749339 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae.G_Atopobium.S_sp__HMT_199 2.85118135327 - K_Bacteria.P_Firmicutes.C_Negativicutes 4.62347625371 Baseline_B_P2 3.90163001198 0.0140365147542 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_maltophilum 2.84005967813 Smoker_24_Weeks_P2 2.98089922152 0.0112948631905 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae.G_Cryptobacterium.S_curtum 2.32952772916 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_392 2.81625336555 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_endodontalis 3.90521469825 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_864 2.6509558274 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_aphrophilus 2.64587648369 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_511 2.95360347641 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_sp__HMT_036 2.13390097486 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae 2.9334866809 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Eggerthia 3.12128354434 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_catoniae_nov_97_719 1.97337840814 - K_Bacteria.P_Actinobacteria 5.53012899326 Smoker_24_Weeks_P2 4.7002336829 0.00570133582286 K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae 3.74503082393 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_ 2.99327405377 - K_Bacteria.P_Firmicutes.C_Clostridia 5.11654807954 Baseline_B_P2 4.20991382131 0.00869394168878 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales 4.3896421852 Smoker_24_Weeks_P2 3.75065214071 0.00389267082375 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_enoeca 2.12017732572 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_133 2.39977518317 - K_Eukaryota.P_Streptophyta.C_Magnoliopsida.O_Ericales.F_Actinidiaceae.G_Actinidia.S_eriantha 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_sp__HMT_166 2.83673404294 Smoker_24_Weeks_P2 3.12583599967 0.00796670607721 K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_vincentii 2.54467856463 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales 4.7670924625 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales 4.18224410499 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_sicca 3.67820580198 Smoker_24_Weeks_P2 3.29040839556 0.0417460594497 K_Archaea.P_Euryarchaeota 2.49905304854 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_175_nov_97_633 3.40975494359 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Marseilla.S_massiliensis_nov_78_189 2.41950835553 - K_Eukaryota.P_Streptophyta.C_Magnoliopsida.O_Ericales.F_Actinidiaceae.G_Actinidia 0.0 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 3.12525191014 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_2_.S_bacterium_HMT_096 2.96896168249 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae 4.41198831655 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilus.S_lacrimalis 2.28176026232 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_324 1.78303265706 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae 5.12369955305 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_526 2.21606631465 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_446 3.20265746353 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_137_nov_97_901 2.5047065445 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_322 3.27934748455 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium 3.59941741759 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Parascardovia.S_denticolens 2.21859229669 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_aphrophilus_nov_97_348 0.0 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_2_.S_bacterium_HMT_350 3.01138820101 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_8_ 2.39278979923 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_ 2.94425710826 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales 4.37988160259 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_odontolyticus 2.35854572075 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella 4.77044170893 Baseline_B_P2 3.86575880443 0.0263388732254 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_414 3.78815660715 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_ 2.58854327112 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_socranskii 3.631225767 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria 2.86691674254 - K_Bacteria.P_Chloroflexi.C_Anaerolineae 2.45901892833 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_ 2.75005595246 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella 4.16449839981 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_granulosa 3.47039604795 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_saccharolytica 2.81289562045 Smoker_24_Weeks_P2 3.20102079663 0.0267863353254 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_dentocariosa 5.0813357938 Smoker_24_Weeks_P2 4.52447205155 0.0394730079836 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_multispecies_spp21_2 2.53409598086 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_ 4.35942076289 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia 3.90584437659 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_498 3.13395333341 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 2.96001319501 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales 4.51465213828 Smoker_24_Weeks_P2 4.07932549151 0.00499243009675 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_6_ 3.06630227057 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Johnsonella.S_ignava 2.34321599237 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_matruchotii_nov_97_813 2.43723192491 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales 5.12369955305 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hofstadii 3.14340338731 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_vestibularis 3.4616536687 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales 3.99260996983 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_buccae 2.92311666473 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_nucleatum_nov_97_018 2.81800265739 - K_Bacteria.P_Bacteroidetes 5.1654459083 Baseline_B_P2 4.30072228585 0.0050654848452 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_gingivicola 3.77740944961 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_vespertina 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_365_nov_97_244 0.0 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_micronuciformis 3.19705522575 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_247 2.41749378823 - K_Bacteria.P_Actinobacteria.C_Actinomycetia 5.46097770758 Smoker_24_Weeks_P2 4.69491292983 0.00885846608421 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella 2.86274693634 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 4.29108887039 - K_Bacteria.P_Absconditabacteria__SR1_ 2.75005595246 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_503 2.66855774516 - K_Archaea.P_Euryarchaeota.C_Methanobacteria.O_Methanobacteriales.F_Methanobacteriaceae 2.49905304854 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_284_nov_97_633 2.61596064134 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_trevisanii 1.37298432091 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_oris 4.03147639207 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia 3.14322106462 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 4.3804834957 Baseline_B_P2 3.65845751464 0.0385066900776 K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 2.45901892833 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera 3.2172516781 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium.S_neglectum 2.92201435076 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_136_nov_97_917 2.54374246967 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pleuritidis 3.67545109528 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_viscosus_nov_95_825 2.52419788299 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_ 3.13615283231 - K_Bacteria.P_Actinobacteria.C_Actinobacteria 4.46832500491 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia 5.09048093453 Baseline_B_P2 4.33555279345 0.00153888678563 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter 3.24353913377 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_ 2.8714669158 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae 2.992113974 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_ 3.34455596732 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae 3.24353913377 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 4.37988160259 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mutans 4.43918319468 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_pallens 3.38244708843 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sanguinis 4.45515512772 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_126 1.51520410751 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_salivarius 3.88299314351 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_ 2.58854327112 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Eubacteriaceae.G_Pseudoramibacter.S_alactolyticus 3.24353913377 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_dentalis_nov_97_688 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_443 2.75942671738 - K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium.S_moorei 3.27837259167 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_histicola 2.95096302412 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_durum_nov_97_183 2.58489531894 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_flavescens 2.23194563755 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_elongata 3.46453764162 Smoker_24_Weeks_P2 3.08922026187 0.00670537177439 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_204 2.36651613346 Smoker_24_Weeks_P2 3.4002766022 0.0417670593655 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella.S_corrodens 3.14646629227 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_jejuni 2.8877232319 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_203 2.97423626187 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_sp__HMT_119 2.08114758327 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_7_ 1.71977927046 - K_Eukaryota.P_Streptophyta.C_Magnoliopsida.O_Ericales 0.0 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_88_911 2.30280377536 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae 2.21696857154 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptococcaceae.G_Peptococcus 2.9334866809 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales 4.82719850055 Baseline_B_P2 4.03706882765 0.00894004309493 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Eggerthellales.F_Eggerthellaceae 2.32952772916 - K_Bacteria.P_Fusobacteria 4.93674363258 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia.S_defectiva 3.16059749866 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_ 3.34455596732 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_066 2.33838347001 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_064 4.0876099821 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia.S_wiggsiae 3.93356282495 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Oribacterium.S_sp__HMT_078 3.51331925032 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_australis 2.78004345133 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales 3.93753504146 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae 4.18224410499 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae 4.77044170893 Baseline_B_P2 3.86575880443 0.0263388732254 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 3.03517499329 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum.S_sp__HMT_097 2.83181563023 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_ 2.87913391532 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_225 2.78404809264 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_223 2.38756911228 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_subflava 0.601517462236 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_221 2.63228156735 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales 3.35147427397 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes 4.77044170893 Baseline_B_P2 3.86575880443 0.0263388732254 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Clostridiales__F_1_.G_Clostridiales__F_1__G_1_ 2.87913391532 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_rubra 2.07417745152 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia 4.33654094551 - K_Archaea.P_Euryarchaeota.C_Methanobacteria 2.49905304854 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Filifactor.S_alocis 3.47854406076 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella 4.10134545533 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae 3.16755016913 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_marshii 2.45821841435 Smoker_24_Weeks_P2 3.05326265106 0.0193615462789 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Mogibacterium 3.7377060481 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_aeria 3.74455099568 Smoker_24_Weeks_P2 3.46092331604 0.000337514165984 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_bacterium_HMT_369 2.8086125492 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_mucilaginosa 3.70993947913 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii_nov_96_679 3.11903959338 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris_nov_95_446 2.34580600419 - K_Bacteria.P_Firmicutes 5.65851992689 Baseline_B_P2 4.67512101807 0.000649486583652 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga 4.03625903341 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_baroniae 2.93022988478 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae 4.36725929495 Baseline_B_P2 3.74115034793 0.038069841872 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia 3.22933222928 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_3_.S_bacterium_HMT_351 2.94425710826 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_adiacens 4.16742683447 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_129 2.43702332935 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae 3.48857976625 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_sp__HMT_362 3.00093053856 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella.S_sp__HMT_521 2.86274693634 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oris 4.11852261446 Baseline_B_P2 3.60025100169 0.00804837190375 K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria 4.08723532125 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella 3.93753504146 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_919 2.11800228524 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_169 4.4047390952 - K_Bacteria.P_Saccharibacteria__TM7_ 4.35942076289 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio.S_sp__HMT_080 2.40333892618 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_multiformis 3.39785858084 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_sp__HMT_370 2.46068816429 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_meyeri 3.32605857786 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_timonensis 2.92138174264 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Ruminococcaceae.G_Ruminococcaceae__G_2_.S_bacterium_HMT_085 2.8714669158 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_canifelinum 2.60019391671 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia_nov_96_324 2.38657239025 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_sp__HMT_473 3.18225827979 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_.O_Absconditabacteria__SR1___O_1_.F_Absconditabacteria__SR1___F_1_.G_Absconditabacteria__SR1___G_1_.S_bacterium_HMT_874 2.34287682116 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_chosunense 2.79504970707 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae.G_Mycoplasma.S_faucium 3.10362693823 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales.F_Propionibacteriaceae.G_Propionibacterium 3.48857976625 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_parahaemolyticus 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_mutans_nov_96_858 2.76674748561 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_shahii 2.95297154611 - K_Bacteria.P_Firmicutes.C_Mollicutes 3.19469436225 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_haemolyticus 2.58115266312 - K_Bacteria.P_Synergistetes.C_Synergistia 3.74503082393 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Sneathia.S_sanguinegens_nov_91_089 1.88562037457 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_479 2.39090219542 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_parasanguinis 2.19237304076 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_6_.S_bacterium_HMT_870 2.74937577361 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 4.97843873102 Baseline_B_P2 4.308567293 0.000432821073468 K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_417 3.45330302606 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_intermedius 4.09143147639 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_oralis 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_3_.S_bacterium_HMT_280 2.78598391868 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales 2.86691674254 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_hongkongensis 3.5231722565 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis 3.60337231864 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae 4.3684158137 Smoker_24_Weeks_P2 3.52068035336 0.00575020827707 K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia.S_sp__HMT_894 2.70548601369 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_oulorum 3.42465786139 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae 4.2724714217 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas 4.28001239313 - K_Bacteria.P_Spirochaetes.C_Spirochaetia 4.18224410499 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_2_ 2.22001918344 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_2_.G_Saccharibacteria__TM7___G_5_.S_bacterium_HMT_356 3.87842118853 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_valvarum 2.92923314176 Smoker_24_Weeks_P2 3.1097928567 0.0174990066686 K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_massiliensis 3.5300000546 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Negativicutes.F_Veillonellaceae.G_Veillonella.S_atypica 3.32537928501 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola.S_abscessus 2.96001319501 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_412 1.88827405651 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia 3.93356282495 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales 3.93239549127 Smoker_24_Weeks_P2 3.52092016052 0.0339827514189 K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_orale 3.33992434335 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_propionica 3.22933222928 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_sp__HMT_044 2.7331781628 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_nanceiensis 2.37867895051 Smoker_24_Weeks_P2 3.44400001894 0.0181758608099 K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_dentium 2.98847760625 - K_Archaea.P_Euryarchaeota.C_Methanobacteria.O_Methanobacteriales.F_Methanobacteriaceae.G_Methanobrevibacter.S_oralis 2.49905304854 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola 2.96001319501 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella 3.96366760416 - K_Eukaryota.P_Streptophyta.C_Magnoliopsida.O_Ericales.F_Actinidiaceae 0.0 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales 4.33224640608 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_ 4.35942076289 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella 3.48675957581 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_ 4.31861017244 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcus.S_stomatis 3.53211055914 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_multispecies_spp38_2 2.55701698291 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Bacillales.F_Gemellaceae.G_Gemella.S_haemolysans 3.40550362905 - K_Bacteria.P_Proteobacteria.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus 2.86691674254 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_sp__HMT_180 3.74441638286 Smoker_24_Weeks_P2 3.23131449496 0.00515084119945 K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_336 2.91143831364 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_335 2.80695071402 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_332 2.91958395619 Smoker_24_Weeks_P2 2.95334190559 0.025891252036 K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_forsythia 3.53194697206 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_multispecies_spp16_2 2.31951309952 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_338 2.74661292082 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_lecithinolyticum 3.02517885342 Smoker_24_Weeks_P2 3.06098239212 0.0164269235522 K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae 4.7670924625 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_ 2.58854327112 - K_Bacteria.P_Synergistetes.C_Synergistia.O_Synergistales 3.74503082393 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 3.90584437659 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_periodonticum 2.79077566805 - K_Bacteria.P_Absconditabacteria__SR1_.C_Absconditabacteria__SR1___C_1_ 2.75005595246 - K_Bacteria.P_Firmicutes.C_Bacilli 5.44312143951 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales 4.36725929495 Baseline_B_P2 3.74115034793 0.038069841872 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_flueggei 2.89181448903 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_sp__HMT_380 3.21015120599 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Bifidobacteriales.F_Bifidobacteriaceae 3.99260996983 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_dentalis 2.96817716882 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Shuttleworthia.S_satelles 3.14322106462 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_sp__HMT_056 2.41666416008 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Marseilla.S_massiliensis_nov_77_473 3.03001890546 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lacrimispora.S_xylanolytica_nov_89_341 2.51333342737 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema 4.18224410499 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 4.90607452589 Baseline_B_P2 4.22240247757 0.000443369183972 K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_ 4.13579929542 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_ 4.18525575274 - K_Bacteria.P_Spirochaetes 4.18224410499 - K_Bacteria.P_Bacteroidetes.C_Bacteroidetes__C_1_.O_Bacteroidetes__O_1_.F_Bacteroidetes__F_1_.G_Bacteroidetes__G_5_.S_bacterium_HMT_511_nov_96_593 2.36208322451 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_amylovorum 1.84510799995 - K_Bacteria.P_Firmicutes.C_Erysipelotrichi.O_Erysipelotrichales 2.6236372475 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_sp__HMT_458_nov_97_431 0.0 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_219 0.0 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_215 3.06723643265 - K_Bacteria.P_Fusobacteria.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_sp__HMT_212 3.05860031446 - K_Bacteria.P_Proteobacteria.C_Gammaproteobacteria 4.54503898393 Smoker_24_Weeks_P2 4.09358572164 0.0109622532623 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_.S_bacterium_HMT_100 3.11198770573 - K_Eukaryota 0.0 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Lactobacillaceae.G_Lactobacillus.S_ultunensis 1.86463467149 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_1_.S__Eubacterium__infirmum 2.84277523669 - K_Bacteria.P_Proteobacteria.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_mucosa 3.20646153508 - K_Bacteria.P_Chloroflexi.C_Anaerolineae.O_Anaerolineales 2.45901892833 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_sp__HMT_442 2.44740692911 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_257 3.05827882349 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_258 2.52044629429 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Parvimonas.S_micra 4.19587390736 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_morbi 3.42983152128 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_uenonis_nov_94_667 2.42631704773 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_invisus 3.93018247827 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Corynebacteriales.F_Corynebacteriaceae 4.3896421852 Smoker_24_Weeks_P2 3.75654466587 0.00389267082375 K_Bacteria.P_Firmicutes.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia 2.96655857643 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Bergeyella.S_sp__HMT_900 2.76164792954 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Butyrivibrio 2.40333892618 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia 3.16059749866 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Lachnospiraceae.G_Lachnospiraceae__G_3_ 3.11198770573 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_gordonii 4.29553799611 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Tannerella.S_sp__HMT_808 3.04549167013 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonellaceae__G_1_.S_bacterium_HMT_132 3.05402751427 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Lachnoanaerobaculum.S_umeaense 2.75712238252 - K_Bacteria.P_Proteobacteria.C_Epsilonproteobacteria.O_Campylobacterales 4.08723532125 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_897 3.70141851539 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_sp__HMT_896 2.96822840281 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Coriobacteriaceae 3.2884951968 Smoker_24_Weeks_P2 3.14155949958 0.0034158903689 K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_artemidis 3.07165272367 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Peptoniphilaceae.G_Peptoniphilus 2.28176026232 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_parvula 3.51067861164 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_376 1.88229793879 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Propionibacteriales 3.48857976625 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_304 3.21526827001 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_300 3.5387698853 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_301 2.29572599452 - K_Bacteria.P_Gracilibacteria__GN02_.C_Gracilibacteria__GN02___C_1_.O_Gracilibacteria__GN02___O_1_.F_Gracilibacteria__GN02___F_1_.G_Gracilibacteria__GN02___G_1_.S_bacterium_HMT_872 2.58854327112 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_275 2.98840517644 - K_Bacteria.P_Gracilibacteria__GN02_ 2.58854327112 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_277 1.77894456193 - K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_profusa 0.0 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_sp__HMT_278 2.60929030524 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Catonella.S_sp__HMT_451 2.57614846118 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister 3.93628758537 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_salivae 3.34127249579 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_veroralis_nov_96_780 2.4251466371 - K_Bacteria.P_Spirochaetes.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_sp__HMT_951 2.19903091266 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_gingivalis_nov_97_665 2.38845836131 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_472 2.77230766522 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_oralis_subsp__tigurinus_clade_070 4.19894704237 Baseline_B_P2 3.84951120221 0.0430263291647 K_Bacteria.P_Firmicutes.C_Clostridia.O_Eubacteriales.F_Peptostreptococcaceae.G_Peptoanaerobacter 2.992113974 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia 4.37988160259 - K_Bacteria.P_Bacteroidetes.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_sp__HMT_475 2.13374811497 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_349 3.67660818641 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_348 2.38779191068 - K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mollicutes__O_1_.F_Mollicutes__F_1_.G_Mollicutes__G_1_.S_bacterium_HMT_504 0.0 - K_Bacteria.P_Actinobacteria.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_cardiffensis 2.70887567367 Smoker_24_Weeks_P2 3.13829132118 0.0417670593655 K_Bacteria.P_Actinobacteria.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Olsenella.S_uli 3.13099940527 - K_Bacteria.P_Bacteroidetes.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_ochracea 3.21340122421 - K_Bacteria.P_Fusobacteria.C_Fusobacteria.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium 4.7670924625 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_israelii 3.66157591976 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_347 3.71661555171 - K_Bacteria.P_Saccharibacteria__TM7_.C_Saccharibacteria__TM7___C_1_.O_Saccharibacteria__TM7___O_1_.F_Saccharibacteria__TM7___F_1_.G_Saccharibacteria__TM7___G_1_.S_bacterium_HMT_346 3.6408121389 - K_Bacteria.P_Actinobacteria.C_Actinomycetia.O_Micrococcales.F_Micrococcaceae 5.11819195203 Smoker_24_Weeks_P2 4.57868967207 0.0178121872311 K_Bacteria.P_Firmicutes.C_Mollicutes.O_Mycoplasmatales.F_Mycoplasmataceae 3.19469436225 - K_Bacteria.P_Firmicutes.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIV_.G_Stomatobaculum 3.57049926558 - K_Bacteria.P_Firmicutes.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_noxia 3.59810983445 - K_Bacteria.P_Firmicutes.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella 4.19609049286 -