K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_intermedia 4.58882054879706 Positive_control 4.233046663263651 1.7721003361361136e-35 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_sp_HMT_219 3.0698617905954175 Supragingival 2.781525366012588 2.5832295017541107e-05 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_Anaeroglobus_geminatus 3.2294873368142722 Subgingival_deep_pockets 2.924194700058322 1.631719912499266e-28 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_durum 3.7526283250013246 Supragingival 3.4599508649789454 1.2508728413462015e-71 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Paludibacteraceae.G_Paludibacteraceae_G1_.S_Paludibacteraceae_G1__bacteriumHMT_274 4.208671508900342 Subgingival_deep_pockets 3.9062327674438757 1.405966791515757e-37 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera.S_Megasphaera_micronuciformis 2.491267660955145 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Peptoanaerobacter.S_Peptoanaerobacter_yurii 3.3617085214716957 Subgingival_shallow_pockets 3.0510418276310856 1.7831016621691946e-11 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_sp_HMT_300 3.23289835053302 Subgingival_deep_pockets 2.9197105478017464 2.9596498403086956e-28 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_parasanguinis 3.64538938639331 Negative_control 3.34290817244491 2.847625786135663e-10 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_Cardiobacterium_hominis 3.2310451319274587 Supragingival 2.9274659877390077 4.0891441032059525e-40 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_262 2.60010697241769 Subgingival_deep_pockets 2.3052457070051613 4.7221771947650177e-14 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_gordonii 4.1006152504357045 Supragingival 3.7945448536571202 1.3360663503016243e-30 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_pallens 3.188105198356879 Subgingival_deep_pockets 2.9073304026561937 0.0003062362520958412 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G3_.S_Lachnospiraceae_G3__bacteriumHMT_100 3.2196532811026954 Supragingival 2.9101638369349248 5.808509620333008e-14 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_Fretibacterium_fastidiosum 3.465540878024482 Subgingival_deep_pockets 3.160498551592099 2.39151465937584e-46 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_elongata 3.3959718249835804 Supragingival 3.099993237938392 4.5869647709241305e-18 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella.S_Mitsuokella_sp_HMT_521 2.455969045926042 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Rhodobacteraceae.G_Paracoccus.S_Paracoccus_marinus_HMT_A13 2.4867423294331767 Subgingival_shallow_pockets 2.18861800981238 3.1111256328507545e-18 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Riemerella.S_Riemerella_sp_HMT_322 3.3797167622505917 Supragingival 3.0839661965203624 2.566067196581664e-38 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_dianae 2.545306796673731 - K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Ruminococcaceae.G_Ruminococcaceae_G1_.S_Ruminococcaceae_G1__bacteriumHMT_075 3.23514504264382 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_subflava 2.99902830630155 Supragingival 2.7594092743715337 1.048383597737849e-07 K_Bacteria.P_Bacillota.C_Bacilli.O_Caryophanales.F_Gemellaceae.G_Gemella.S_Gemella_haemolysans 3.7169919853020974 Supragingival 3.413547601814813 2.3181572862082675e-28 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_sp_HMT_473 3.208277896211936 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_sp_HMT_317 3.6897272076711736 Subgingival_deep_pockets 3.3846086193591423 3.6664296430739756e-15 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_wadei 3.7903140594171645 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia.S_Abiotrophia_defectiva 3.441454906653617 Supragingival 3.1401060676341843 2.4719980238888326e-27 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_336 3.1651110617283136 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas.S_Sphingomonas_hankookensis 3.1636544973990803 - K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_denticola 3.811853111904261 Subgingival_deep_pockets 3.5074393894875024 4.699468873383104e-51 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_oralis 3.5136882993330363 Supragingival 3.224282530059546 4.959367919684485e-13 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_melaninogenica 3.71167777430284 Subgingival_deep_pockets 3.4301365721997543 1.7884831324502292e-12 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_granulosa 3.8304564676997583 Supragingival 3.5215213757773074 4.868165946884367e-16 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_gingivalis 3.7110666944054684 Supragingival 3.4146591739958265 3.6873537605042625e-37 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_oris 4.2113099493704516 Subgingival_deep_pockets 3.898548989571892 8.453619444144278e-56 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_Arachnia_propionica 3.7674865519302867 Supragingival 3.46256104817768 3.5064656194019074e-45 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_230 2.4090386989276245 Subgingival_deep_pockets 2.1210186196315846 0.00048203552600070357 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_infantis 3.93098514559109 Negative_control 3.6602966272671167 3.278264637329001e-05 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_056 2.756023373234491 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_veroralis 3.4291387790617875 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_trevisanii 3.3676935349582804 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp_HMT_170 3.475924166920821 Supragingival 3.169609593824794 2.58670684008696e-27 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium.S_Bifidobacterium_dentium 2.9816796479747882 Subgingival_deep_pockets 2.7158360169077165 1.9587470754486106e-09 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_mitis 4.9939820566795206 Negative_control 4.7245359358133765 1.0054233676919484e-37 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_periodonticum 4.031257639647553 Supragingival 3.7216074297145822 5.029951554781406e-18 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Chryseobacterium.S_Chryseobacterium_haifense 2.737507791047829 - K_Bacteria.P_Chloroflexota.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae_G1_.S_Anaerolineae_G1__bacteriumHMT_439 2.785340806877996 Subgingival_deep_pockets 2.4912457235741745 3.3221324605436316e-22 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F3_.G_Saccharimonadales_F3G1_.S_Saccharimonadales_F3G1__bacteriumHMT_355 2.272107908331017 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_multiformis 3.1374292647476483 Subgingival_deep_pockets 2.886223871916989 4.077033626651409e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_loescheii 3.5144144519032356 Negative_control 3.264339944604866 0.014670692902905824 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_paraphrophilus 2.625089163469556 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_timonae 2.516523446697005 Subgingival_deep_pockets 2.2178008480767994 0.008128215196681325 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Tannerella.S_Tannerella_serpentiformis 3.8101625293170107 Supragingival 3.506310271087014 2.8294196807707146e-30 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_sp_HMT_308 3.2521320064089725 Negative_control 3.087803846598686 0.016883362348756936 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_066 2.8661479364355102 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosyncoccaceae.G_Nanosyncoccus.S_Nanosyncoccus_sp_HMT_351 3.834184681182729 Negative_control 3.469841050926625 1.8647920065506e-09 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_bilenii 1.97029863029065 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hallella.S_Hallella_sp_HMT_315 2.325445896809009 Subgingival_deep_pockets 2.030604656157444 1.5471993661846363e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_sp__oral_taxon_472 3.2996482752744196 Subgingival_shallow_pockets 2.9911988102121074 7.539188049234346e-05 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_maltophilum 2.9908754397970148 Subgingival_deep_pockets 2.6994569550872076 1.1150868285746159e-25 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_artemidis 2.456422511051805 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_275 3.509719579498685 Supragingival 3.2150263260686467 2.748092387864089e-08 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_periodontitidis 3.475384523011087 Supragingival 3.1719172444087897 1.9571530295047474e-16 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia.S_Scardovia_wiggsiae 2.8743375005056047 Subgingival_deep_pockets 2.5756093936633464 3.4537258092306608e-12 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_sp_HMT_212 4.0348064280033045 Supragingival 3.724797339121004 9.600038331483795e-26 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas.S_Saccharimonas_sp_HMT_869 2.5113651248581483 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonadaceae_G1_.S_Selenomonadaceae_G1__bacteriumHMT_155 2.2641121352665032 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_leadbetteri 3.3073893195050745 Supragingival 3.000511791858343 1.1819576711779872e-05 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_koreensis 3.303887775965107 Subgingival_deep_pockets 2.9918741022159177 7.270926978664095e-16 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_Granulicatella_sp__HMT_D03 2.874933882129864 Subgingival_shallow_pockets 2.5786369425508164 1.2839545651035763e-26 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Micrococcaceae.G_Micrococcus.S_Micrococcus_luteus_HMT_C78 2.999154736940216 Subgingival_shallow_pockets 2.7018343069819295 2.2033516733891563e-26 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Peptococcaceae.G_Peptococcus.S_Peptococcus_sp_HMT_167 2.820469054059302 Subgingival_deep_pockets 2.5161839842661733 8.630052761963293e-22 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_sp_HMT_203 4.146264316053812 Subgingival_shallow_pockets 3.8485631377069773 4.57151337061192e-06 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_284 3.0176797895916683 Supragingival 2.7860504482894797 0.0014856444305220865 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_Cardiobacterium_valvarum 2.872880333021958 Supragingival 2.570456906584153 1.0697933011344243e-10 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_infelix 2.9243334507852294 Subgingival_shallow_pockets 2.6161459086024106 4.1547080633658115e-07 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_baroniae 2.744543697026796 Subgingival_deep_pockets 2.442965220532316 5.621203557969839e-09 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Stomatobaculum.S_Stomatobaculum_longum 2.565636855026934 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_335 2.8818887031682467 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_sp_HMT_475 2.590561643605354 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_sp_HMT_913 2.313639126961762 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_sp_HMT_443 2.9931719526299276 Subgingival_deep_pockets 2.6964093602607484 1.3223705979402093e-08 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_mucosa 3.269920274696601 Supragingival 2.995280013665626 1.8968047241932836e-13 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_baumannii 4.4347354299751425 Negative_control 4.092976331699965 1.2904582221257003e-46 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_324 2.39378070050948 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_oris 4.128202135502936 Supragingival 3.8275578977144358 1.1969703770369886e-109 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_058 5.283361065895495 Positive_control 4.975095306745993 3.541314628473199e-54 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_sp_HMT_914 2.137389025359936 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_salivarius 3.8720794991254084 Negative_control 3.471095116312698 0.00011896538984957067 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_oulorum 3.357398861132969 Subgingival_deep_pockets 3.062540664644406 5.355129756390359e-09 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_anginosus 3.1417888406193395 Subgingival_deep_pockets 2.85248028062378 9.699930926166479e-06 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_jejuni 3.6516565906764935 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_864 3.2654178298578604 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_fusca 3.145548985190552 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_parvula 3.920562680753226 Supragingival 3.611323286650329 9.359040470413328e-18 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_278 3.062817990789144 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G2_.S_Lachnospiraceae_G2__bacteriumHMT_088 2.334180064160175 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_cristatus 4.218674135734855 Supragingival 3.9158118390698338 4.2024793049224577e-45 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_sp_HMT_304 3.3989354060421038 Subgingival_deep_pockets 3.1259286657149654 6.259254718061289e-10 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_Schaalia_sp_HMT_180 2.6927115910112747 Supragingival 2.400860628641173 2.165695404141709e-08 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_Rothia_mucilaginosa 4.032762982797137 Negative_control 3.7065684191068358 1.929796106476699e-14 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_flueggei 2.4654065999047687 - K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_236 2.13821575928682 0.022435059926421565 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_dispar 3.5552846046492825 Subgingival_shallow_pockets 3.2574796018879675 3.43331629314341e-13 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Moraxella.S_Moraxella_osloensis 3.6587316981524354 Subgingival_shallow_pockets 3.350189693763499 1.312597818980479e-99 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_277 2.849856857115782 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_Dialister_invisus 3.9921085810382073 Subgingival_deep_pockets 3.6872596314866057 1.3067006876792527e-76 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_sicca 3.157492460334065 Supragingival 2.8438868129734254 0.01003325233292238 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_buccalis 4.01848310752171 Supragingival 3.7257170144023313 1.7802937907800184e-12 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Tannerella.S_Tannerella_sp_HMT_916 2.600113966891253 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_intermedius 4.062826394877697 Subgingival_shallow_pockets 3.751217367801244 8.817147151704313e-21 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_sp_HMT_314 3.8193671962698486 Negative_control 3.449678811108117 3.3805936610808515e-06 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus.S_Anaeroglobus_massiliensis 2.501594750871373 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Agrobacterium.S_Agrobacterium_tumefaciens 2.7428097552514714 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G5_.S_Anaerovoracaceae_G5__saphenum 2.4717461463337007 Subgingival_deep_pockets 2.1802217045359273 1.2123634701959288e-12 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_parasanguinis_I 2.9847875951200944 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Oribacterium.S_Oribacterium_sp_HMT_078 3.3585538575705516 Subgingival_deep_pockets 3.0479343915761254 3.7621529092524917e-22 K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIVa_.G_Lachnospiraceae__G_.S_Lachnospiraceae__G__sp__HMT_B32 2.772849972366255 - K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium.S_Solobacterium_moorei 3.1842785388446257 Subgingival_deep_pockets 2.88433838938684 3.548517321639916e-20 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_Haemophilus_haemolyticus 2.9105429511640533 Supragingival 2.619483775924921 2.7520355848859596e-05 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_naviforme 3.830690304761436 Subgingival_deep_pockets 3.5190837548932428 3.3454056570188445e-20 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_231 3.392563470362407 Subgingival_deep_pockets 3.103701754078825 1.654911715208846e-24 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_histicola 4.0596372124349775 Negative_control 3.7242786453417738 0.011794788596176982 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp__oral_taxon_064 3.8546738429338383 Supragingival 3.5463608404803395 2.136433364781118e-14 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Chryseobacterium.S_Chryseobacterium_profundimaris 2.873142795250058 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnoanaerobaculum.S_Lachnoanaerobaculum_umeaense 3.1783064763529683 Supragingival 2.865526061165691 1.26979401065066e-12 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_sp_HMT_892 2.545298236310651 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_Kingella_oralis 3.3726682025052455 Supragingival 3.0758722134639167 1.1526674204824088e-33 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_constellatus 3.22830758684129 Subgingival_deep_pockets 2.9276038273806444 9.496085217744798e-19 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_medium 2.6763939805559738 Subgingival_deep_pockets 2.384871861698079 6.550578275689618e-17 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_gingivalis 5.42298815392659 Positive_control 5.097588413440264 1.16649419562311e-56 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_sp_HMT_458 3.2686120918845165 Supragingival 2.9547024785959617 4.6182171438539506e-09 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_showae 3.398521159613904 Supragingival 3.0934087629956295 1.4216595766509038e-15 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_247 2.9156232046082264 Subgingival_deep_pockets 2.624530559792297 7.823990944717115e-10 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_.S_Odoribacteraceae_G5__bacteriumHMT_511 3.2706453827695112 Subgingival_deep_pockets 2.9717899441553954 3.7589900086154215e-13 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_flavescens 4.691627102715515 Positive_control 4.372005810674674 1.1000953719593645e-76 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_sp_HMT_780 3.8820702717160054 Negative_control 3.5744268485124215 0.0006816366739275527 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_concisus 3.3226058043167153 Subgingival_shallow_pockets 3.01639935133792 9.11783096612315e-12 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sputigena 3.7752940662063414 Supragingival 3.485964196089055 9.169471293766322e-33 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_sp_HMT_392 3.920719396655086 Supragingival 3.604660851368363 1.9323979881654342e-16 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_saccharolytica 3.3976259443910943 Negative_control 3.0612327058091 3.432419440552054e-07 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Tannerella.S_Tannerella_forsythia 4.040484185821077 Subgingival_deep_pockets 3.6476924981342775 5.8237629688562486e-74 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_socranskii 3.3522030043904496 Subgingival_deep_pockets 3.0526534395927283 4.3564580850643994e-61 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_sp_HMT_370 2.887006600526884 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister.S_Dialister_pneumosintes 3.1999746835911935 Subgingival_deep_pockets 2.899077874679338 1.5210297070939917e-42 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_goodfellowii 3.6160627008199433 Subgingival_shallow_pockets 3.3089194640750574 7.470609475358623e-12 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Parvimonas.S_Parvimonas_micra 3.983105847699077 Subgingival_deep_pockets 3.6841947426375907 3.147659276603635e-72 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Peptoniphilaceae_G1_.S_Peptoniphilaceae_G1__bacteriumHMT_113 2.553377043995909 Subgingival_deep_pockets 2.250602512836047 7.540568534629223e-11 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_380 3.063665567106956 Supragingival 2.7780606446111955 9.531708244912486e-08 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_polymorphum 5.107841409431324 Positive_control 4.734550464123291 5.485070769330003e-57 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_vestibularis 4.097214059879129 Negative_control 3.7654294773291777 5.221792854803427e-10 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_070 3.207132060428519 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanoperiomorbaceae.G_Nanoperiomorbus.S_Nanoperiomorbus_periodonticus 4.0992594730132375 Subgingival_deep_pockets 3.7954001154179378 4.1556399728583835e-29 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sanguinis 4.495063563956179 Supragingival 4.134805784833942 5.83945854154519e-64 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_pleuritidis 3.9119325045788673 Subgingival_deep_pockets 3.6108603817330973 3.12632785576743e-20 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Parvisynbacteraceae.G_Parvisynbacter.S_Parvisynbacter_sp_HMT_348 3.727692686880749 Supragingival 3.428422117978562 1.1665216322730912e-11 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_gracilis 3.9192502365039332 Subgingival_deep_pockets 3.6177790008934347 2.419538031610353e-55 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_australis 3.042104626483411 Subgingival_shallow_pockets 2.7539808618827073 4.2169545753285655e-06 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_930 2.286947402768598 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp__HMT_B57 3.1849894189837697 Subgingival_shallow_pockets 2.89183241963184 0.00038404722591303117 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_Fretibacterium_sp_HMT_362 3.225344642167326 Subgingival_deep_pockets 2.9227201340114326 2.3709557003643005e-16 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_vespertina 3.6284090347596885 Negative_control 3.2893908284554407 0.023316701067445683 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_vincentii 2.340966367405404 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G1_.S_Anaerovoracaceae_G1__infirmum 3.3938068000780435 Subgingival_deep_pockets 3.152579119953825 3.1558186931357365e-39 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_nanceiensis 2.3936494945759064 Subgingival_shallow_pockets 2.0714813306756317 0.0003273041144451732 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_buccae 2.6232090822639287 Subgingival_deep_pockets 2.3271896094919953 3.0324819497555463e-12 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Gallibacter.S_Gallibacter_brachus 3.1910922257424827 Subgingival_deep_pockets 2.897407977188441 3.5674704904302607e-47 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Parvimonas.S_Parvimonas_sp_HMT_393 2.4680614935528515 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Filifactor.S_Filifactor_alocis 3.7844953692998495 Subgingival_deep_pockets 3.4874032337487217 4.181663421745102e-44 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_sp__HMT_A16 2.9991420242214626 Supragingival 2.6984576636702444 7.099016474225681e-33 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_lecithinolyticum 3.4067427482160784 Subgingival_deep_pockets 3.111675293209531 7.836218676885829e-28 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_257 2.8817139866335375 Subgingival_deep_pockets 2.5815866217907475 9.09067625111764e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_sp__oral_taxon_292 2.4217084481251345 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_actinomycetemcomitans 5.011493346909061 Positive_control 4.703772321752485 0.0 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_Granulicatella_elegans 2.9386614017464066 Supragingival 2.6367557200590395 1.0410751529015518e-12 K_Bacteria.P_Bacillota.C_Bacilli.O_Bacillales.F__Exiguobacteraceae_.G_Exiguobacterium.S_Exiguobacterium_acetylicum 3.1498555505491592 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp__HMT_B43 2.622005393959204 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_rava 2.3814337014637665 Subgingival_deep_pockets 2.083743610121774 0.00012868021151460595 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp__HMT_B66 3.426765273436104 Supragingival 3.1368542465981673 3.707490631169979e-05 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Johnsonella.S_Johnsonella_ignava 2.9374129257273864 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Rhizobium.S_Rhizobium_larrymoorei_HMT_D45 2.352249001113291 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae.G_Cutibacterium.S_Cutibacterium_acnes 4.75034416109801 Negative_control 4.411047783252131 1.8006839533564214e-42 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnoanaerobaculum.S_Lachnoanaerobaculum_saburreum 3.046944632601173 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_Rothia_dentocariosa 4.889821343312003 Supragingival 4.593628552848065 1.0441827199691002e-108 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_meningitidis 2.284753081951782 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas.S_Brevundimonas_diminuta 3.215708572581192 Subgingival_shallow_pockets 2.9218588324082035 1.5550797745455948e-43 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia.S_Lautropia_mirabilis 3.618139040482681 Supragingival 3.318767520250208 3.4306953946526043e-31 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia.S_Ottowia_sp_HMT_894 2.648680218459109 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_Haemophilus_parainfluenzae 4.11714048653085 Supragingival 3.8147865833947536 8.614667922488472e-27 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_sp_HMT_481 2.1387362658358673 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_rogosae 2.9472009603765175 - K_Bacteria.P_Actinomycetota.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_Lancefieldella_parvula 3.3482318689227717 Negative_control 3.0954460934344317 5.8070957890748656e-06 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Shuttleworthia.S_Shuttleworthia_satelles 2.482407199108668 Subgingival_deep_pockets 2.1919941870117867 1.523263827363453e-14 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_412 2.887936485623518 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Peptoanaerobacter.S_Peptoanaerobacter_stomatis 2.4050762459235226 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola.S_Phocaeicola_abscessus 2.896983629751786 Subgingival_deep_pockets 2.5923866736415433 5.551598360335177e-15 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Oribacterium.S_Oribacterium_sinus 2.891356928916447 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_oralis 4.354247334653452 Supragingival 4.048523682136973 1.3994031342573949e-47 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_rectus 2.8146634560923576 Subgingival_deep_pockets 2.5003526496322945 5.333496119107488e-16 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Moraxella.S_Moraxella_sp__HMT_B07 3.1543043586147634 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_423 4.21504402724818 Supragingival 3.921022894611472 3.464547560105733e-24 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_pasteri 3.997355487246155 Supragingival 3.6777693518131596 1.0233286860207661e-22 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_.S_Odoribacteraceae_G5__bacteriumHMT_505 2.3989111517384547 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_sp__HMT_A58 4.054948209388034 Subgingival_shallow_pockets 3.7325031354118234 6.372832673316041e-173 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G3_.S_Odoribacteraceae_G3__bacteriumHMT_365 2.9016871567291496 Subgingival_deep_pockets 2.6218195118943988 1.090796624878684e-24 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanogingivalaceae.G_Nanogingivalis.S_Nanogingivalis_gingivitcus 2.677326058872537 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_sp_HMT_898 2.798352876601793 Supragingival 2.491924763417335 9.02237338049921e-07 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_Peptidiphaga_gingivicola 2.7961594276805357 Supragingival 2.4920315633003343 2.469304706324007e-18 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_shahii 3.0232635028471906 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G3_.S_Odoribacteraceae_G3__bacteriumHMT_280 2.6255785652022388 Subgingival_deep_pockets 2.337726706309275 2.3752064677352407e-15 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_sp__HMT_C99 3.021852363922628 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sinensis 2.3044870152196517 - K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mycoplasmoidales.F_Metamycoplasmataceae.G_Metamycoplasma.S_Metamycoplasma_faucium 2.89476436761352 Subgingival_deep_pockets 2.595979397932151 2.2763835445963666e-18 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_323 2.696960453203606 - K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales.F_Absconditicoccaceae.G_Absconditicoccaceae_G1_.S_Absconditicoccaceae_G1__bacteriumHMT_874 3.4124442202823486 Negative_control 3.162602441758526 0.000812944442745595 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_417 3.718009932948184 - K_Bacteria.P_Deinococcota.C_Deinococci.O_Deinococcales.F_Deinococcaceae.G_Deinococcus.S_Deinococcus_wulumuqiensis 2.9665918091460775 Subgingival_shallow_pockets 2.7079065233388167 7.070817440132991e-18 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Delftia.S_Delftia_sp__HMT_A59 2.617776499234112 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnoanaerobaculum.S_Lachnoanaerobaculum_sp_HMT_083 2.0790472768683737 - K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales.F_Absconditicoccaceae.G_Absconditicoccaceae_G1_.S_Absconditicoccaceae_G1__bacteriumHMT_345 2.8411302757686787 Subgingival_deep_pockets 2.556866959352298 1.6420196807435418e-06 K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mycoplasmoidales.F_Metamycoplasmataceae.G_Metamycoplasma.S_Metamycoplasma_salivarium 2.6572969419693155 Subgingival_shallow_pockets 2.3781734065265576 2.5816455839130842e-08 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_aphrophilus 2.8436588896021555 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnoanaerobaculum.S_Lachnoanaerobaculum_orale 2.1524696065196065 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Peptostreptococcaceae.G_Peptostreptococcus.S_Peptostreptococcus_stomatis 3.144361661624851 Subgingival_deep_pockets 2.8447001785346084 7.043402631941228e-21 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_sp__oral_taxon_512 2.7782152028823495 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp_HMT_338 2.9242755054861473 Subgingival_shallow_pockets 2.6122255052287247 3.219110262927164e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_salivae 2.825126376980472 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_sp_HMT_513 3.306954680823666 Subgingival_shallow_pockets 3.0276017407007205 5.71457757265882e-05 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Clostridiales_F1_.G_Clostridiales_F1G1_.S_Clostridiales_F1G1__bacteriumHMT_093 2.7410850507245477 Subgingival_deep_pockets 2.4449598576888576 1.3004207251087807e-17 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_tannerae 4.233065773049536 Subgingival_deep_pockets 3.936363161339477 4.886737693842773e-38 K_Bacteria.P_Actinomycetota.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella.S_Lancefieldella_rimae 3.283568501288952 Subgingival_deep_pockets 2.9879059395106133 7.752867722918036e-36 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_johnsonii 4.04683580656725 Subgingival_shallow_pockets 3.7520886024757587 3.6592370421653715e-180 K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus.S_Desulfobulbus_oralis 2.293187921422357 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_sp__HMT_C51 2.5786572052635286 - K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae_G1_.S_Erysipelotrichaceae_G1__bacteriumHMT_905 2.2173482787833265 9.47992832260694e-10 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Microbacteriaceae.G_Microbacterium.S_Microbacterium_hydrothermale 3.6286714635002992 Subgingival_shallow_pockets 3.309758523959602 5.189533286872219e-24 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_micans 3.000121050901159 Subgingival_shallow_pockets 2.7259276570192545 2.54115709658754e-06 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Tannerella.S_Tannerella_sp_HMT_808 3.2777324915471904 Subgingival_deep_pockets 2.9789994572569767 4.51969255920235e-22 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_pharyngis 3.2764157477928704 Supragingival 2.9383146578093355 0.0005348702909889416 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_vincentii 4.948503568734278 Subgingival_deep_pockets 4.646956539318135 9.522398661391047e-92 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_074 3.191804707471369 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas.S_Saccharimonas_sp_HMT_349 3.474606584320544 Subgingival_deep_pockets 3.1631643382662635 3.0869509965488646e-20 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_234 2.477878896887084 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_atypica 3.390016321440927 Negative_control 3.0831753282983936 0.04784985336112065 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas.S_Saccharimonas_sp_HMT_347 3.9167804423080144 Supragingival 3.616836398499156 3.5573520819557394e-53 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteria__O_.F_Fusobacteria__F_.G_Fusobacteria__G_1_.S_Fusobacteria__G_1__sp__HMT_A71 3.3426586337994193 Subgingival_deep_pockets 3.05285887707 0.006134610024269677 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_segnis 2.971925554329168 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp_HMT_448 2.648237149525895 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_sp_HMT_057 2.821248279314923 - K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales.F_Absconditicoccaceae.G_Absconditicoccaceae_G1_.S_Absconditicoccaceae_G1__bacteriumHMT_875 2.9234956588076586 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_flava 3.303396767583893 Supragingival 2.987110093674641 2.1562424933071753e-07 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_sp__str__DR1 3.3269528336344543 - K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp__oral_taxon_175 3.9154721520321334 Supragingival 3.622553413952395 1.2041008573063005e-102 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_Fretibacterium_sp_HMT_359 3.2255720384325444 Subgingival_deep_pockets 2.9268240154955305 3.816984977032322e-22 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Micrococcaceae.G_Micrococcus.S_Micrococcus_luteus_HMT_H68 2.9951305239738377 Subgingival_shallow_pockets 2.6834811068947206 4.165666489766666e-24 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp__HMT_B94 2.526789474841778 Subgingival_deep_pockets 2.21900750482026 2.0031006570108463e-06 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia.S_Arachnia_rubra 2.521318868850302 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_223 3.08868378220153 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_naeslundii 3.2149104688201 Supragingival 2.9139796154740054 1.269805517589954e-29 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_253 2.468969976035511 - K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia.S_Bulleidia_extructa 2.427806261393596 Subgingival_deep_pockets 2.132787471050371 1.4554355416944863e-06 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_sp_HMT_134 2.8271747821017987 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_Haemophilus_parahaemolyticus 2.22098742853734 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingobium.S_Sphingobium_yanoikuyae 2.800358237002844 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides.S_Bacteroides_pyogenes 2.3351134359096406 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Weeksellaceae_G1_.S_Weeksellaceae_G1__bacteriumHMT_900 2.9063239503099116 Supragingival 2.6021965945066046 3.871676617688817e-10 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas.S_Pseudomonas_fluorescens 4.981236496367434 Negative_control 4.617117535926551 6.587583209658941e-110 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_sp__oral_taxon_902 2.7856861025756 - K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_sp_HMT_044 2.9492125839323333 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_909 2.5954215268569643 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_noxia 3.442166652356505 Supragingival 3.1331419572038355 3.0838406875747943e-13 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_haemolytica 2.5099969908255266 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas.S_Saccharimonas_sp_HMT_346 3.8913585684013445 Subgingival_deep_pockets 3.5790929995577105 2.6456149376160123e-38 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_mutans 4.787515165963635 Positive_control 4.465002723025836 8.278837624668191e-109 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Spirochaetaceae.G_Treponema.S_Treponema_sp__HMT_G85 2.4044466510212033 Subgingival_deep_pockets 2.140775142417896 3.56297015315154e-06 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella.S_Granulicatella_adiacens 3.6790179925690993 Supragingival 3.3807592260307233 4.2847094560573716e-30 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hallella.S_Hallella_dentalis 2.6622358164996593 Subgingival_deep_pockets 2.3466261838182207 1.159127645044638e-09 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_Rothia_aeria 4.276122308088373 Supragingival 3.900606746449167 1.1107181136886303e-68 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_matruchotii 4.647719616751729 Supragingival 4.34396185098237 3.156009893860539e-128 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas.S_Brevundimonas_subvibrioides 2.4801969514667186 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F1_.G_Saccharimonadales_F1G1_.S_Saccharimonadales_F1G1__bacteriumHMT_350 2.7510610585872466 Subgingival_shallow_pockets 2.4579746078633025 0.0017180217823070615 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_Schaalia_meyeri 2.2813677949593405 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter.S_Odoribacter_sp_HMT_516 2.75713219973411 Subgingival_deep_pockets 2.4728912466028707 1.573457475360525e-05 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_animalis 4.726049260704724 Subgingival_deep_pockets 4.414113797877024 1.559699942016733e-65 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas.S_Brevundimonas_vesicularis_HMT_C59 2.982792570657291 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_denticola 3.960424527396387 Subgingival_deep_pockets 3.666377686553418 1.760861632970645e-32 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_maculosa 3.0720915475161066 Subgingival_shallow_pockets 2.7717507431063897 2.5578778306667983e-10 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosynbacteraceae.G_Nanosynbacter.S_Nanosynbacter_lyticus 3.4107375196756164 Supragingival 3.110147148226673 1.627310312336376e-09 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Asticcacaulis.S_Asticcacaulis_excentricus 3.197392614896544 - K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Intrasporangiaceae.G_Janibacter.S_Janibacter_hoylei 2.6013388439847223 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_marshii 2.378992821936943 Subgingival_deep_pockets 2.0748183619578926 0.002361587210713093 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga.S_Peptidiphaga_sp_HMT_183 2.3818364841887756 - K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_.S_Peptostreptococcaceae__XI__G_4__sp__oral_taxon_369 2.8537177213214453 Subgingival_deep_pockets 2.55178172002454 5.041915691647211e-27 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_nucleatum_subsp__animalis 3.6081423186004344 Subgingival_deep_pockets 3.3139215162079796 3.4749165014073807e-07 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G4_.S_Anaerovoracaceae_G4__bacteriumHMT_103 2.52084460733344 Subgingival_deep_pockets 2.254210020136105 1.6529044044618377e-12 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_sp_HMT_919 2.1541095749119523 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_oralis 2.811452472140427 Subgingival_deep_pockets 2.5066293080419335 4.203867192072731e-10 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas.S_Brevundimonas_mediterranea 2.5274233834794804 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_218 2.3783830879593526 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus.S_Haemophilus_sp_HMT_036 2.7031323492472996 Supragingival 2.378843893296445 4.204087685594507e-06 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_.S_Odoribacteraceae_G5__bacteriumHMT_507 2.5342768054947586 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_johnsonii 2.9326692024805174 Supragingival 2.6359514738611027 9.421087894223013e-39 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_sp_HMT_215 3.7551647195565776 Negative_control 3.358215811626289 5.614720745501082e-13 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Chryseobacterium.S_Chryseobacterium_gleum 4.473254377239028 Negative_control 4.158364783205027 1.0005957615269328e-43 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia.S_Schaalia_odontolytica 2.289976747091562 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Butyrivibrio.S_Butyrivibrio_sp_HMT_080 2.5070101208154365 Subgingival_deep_pockets 2.1898926187196586 0.001142569190597068 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_catoniae 3.9470430267978123 Supragingival 3.63710561290561 1.3531345406826378e-20 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_463 2.810829673788788 - K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter.S_Campylobacter_sp__HMT_G43 2.445445035105971 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas.S_Selenomonas_sputigena 3.4547271016383347 Subgingival_deep_pockets 3.1634541704998203 6.654017258210139e-28 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Catonella.S_Catonella_morbi 3.5554071807996896 Subgingival_deep_pockets 3.25324349664703 7.100484725628386e-29 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Catonella.S_Catonella_sp_HMT_451 2.718160803236954 Subgingival_deep_pockets 2.4192429769129222 8.979960995520205e-11 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Dethiosulfovibrionaceae.G_Pyramidobacter.S_Pyramidobacter_piscolens 2.433483224565533 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella.S_Eikenella_corrodens 3.083350902233328 Supragingival 2.7852889721639063 1.0111077567076172e-09 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_498 3.292557846334345 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella.S_Kingella_denitrificans 3.0080365639270576 Supragingival 2.7123454362183828 2.51110999403121e-07 K_Bacteria.P_Bacillota.C_Bacilli.O_Caryophanales.F_Gemellaceae.G_Gemella.S_Gemella_morbillorum 3.8194991981175406 Supragingival 3.5101768730793133 2.2691841047085612e-24 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_lwoffii 3.691646714787419 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Moryella.S_Moryella_sp_HMT_097 2.6209093232894523 Negative_control 2.3404339168480566 0.006749227740004325 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_221 3.134646457745615 - K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_237 3.749506910243642 Subgingival_deep_pockets 3.4448841789129343 4.41695108799068e-33 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Ruminococcaceae.G_Ruminococcaceae_G2_.S_Ruminococcaceae_G2__bacteriumHMT_085 2.3061014788932477 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonadaceae_G1_.S_Selenomonadaceae_G1__bacteriumHMT_150 2.462669018934424 Subgingival_deep_pockets 2.167815702554172 4.3739880744460203e-16 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_gerencseriae 2.379080799013102 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Veillonellaceae.G_Selenomonas.S_Selenomonas_sp__oral_taxon_137 2.4769623436223815 - K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Parvimonas.S_Parvimonas_sp_HMT_110 3.682755397540171 Subgingival_shallow_pockets 3.371070419546661 4.376568422904323e-09 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_sp__HMT_D28 2.7972349837910637 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_sp_HMT_225 3.4316792136773944 Supragingival 3.1142153780985558 6.906570973630225e-12 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_hofstadii 3.880943372658749 Supragingival 3.578452881598961 1.5793962351720276e-15 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia.S_Leptotrichia_hongkongensis 4.04740666075012 Supragingival 3.74021560099061 7.973991388142983e-26 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G8_.S_Lachnospiraceae_G8__bacteriumHMT_500 2.563599643640971 Subgingival_deep_pockets 2.2681107800881968 1.362127810849292e-15 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Johnsonella.S_Johnsonella_sp_HMT_166 2.762724545523948 Subgingival_shallow_pockets 2.460395661278208 9.27532341159753e-08 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_massiliensis 2.752027490543324 Supragingival 2.466849835818224 7.945703387614929e-28 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_nucleatum_sensu_stricto 3.6877243652519054 Negative_control 3.436004503469337 0.028110710781193173 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema.S_Treponema_sp_HMT_238 2.714301659628079 Subgingival_deep_pockets 2.416936031941544 1.3042727441440565e-07 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_sp_HMT_204 4.0336344248439255 Subgingival_shallow_pockets 3.7372057112036887 5.833201215356794e-17 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_endodontalis 4.3864808145556875 Subgingival_deep_pockets 4.087728329436027 9.953464786610547e-52 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium.S_Fretibacterium_sp_HMT_360 3.6436771563573176 Subgingival_deep_pockets 3.344399255027015 1.1074581116505838e-41 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp__oral_taxon_175_nov_97_963 2.801879810824563 Supragingival 2.5141145934175517 1.2311670904172501e-17 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_oralis_nov_97_988 2.250120799774522 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_intermedia_nov_97_172 3.604602823375953 Positive_control 3.2842135347125128 6.616444763243216e-107 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_matruchotii_nov_97_980 2.7801299045949257 Supragingival 2.4788139571569947 1.0378761152435583e-06 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas.S_Saccharimonas_sp_HMT_869_nov_95_806 2.4374042292205442 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_278_nov_97_764 2.574393856406679 Supragingival 2.2585401049017793 0.013108711580520759 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_gingivalis_nov_96_234 2.680682114193937 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_sp_HMT_300_nov_97_764 2.67907979259381 Subgingival_deep_pockets 2.372708548680264 9.152726010179227e-11 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_.S_Odoribacteraceae_G5__bacteriumHMT_511_nov_96_894 2.376708003373607 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_sp_HMT_284_nov_97_760 3.2009963875658163 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_melaninogenica_nov_96_559 2.654188198864213 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_gingivalis_nov_90_586 2.547244693531015 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_sp_HMT_215_nov_97_840 2.6811519371984494 - K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Parvimonas.S_Parvimonas_sp_HMT_110_nov_97_699 2.524185307898784 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Paracoccaceae.G_Rhodobacter.S_Rhodobacter_capsulatus_nov_96_305 2.7697142942201993 Subgingival_shallow_pockets 2.4615685167065418 2.436485584187108e-34 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella.S_Hoylesella_pleuritidis_nov_97_358 2.629171787368939 Subgingival_deep_pockets 2.32734693828762 6.000759727097087e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella.S_Alloprevotella_tannerae_nov_94_737 2.6526582604859454 Subgingival_deep_pockets 2.3508432251614844 7.610066155203003e-10 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_granulosa_nov_84_948 2.586129555162507 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_intermedius_nov_97_633 2.354318163194941 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Cloacibacterium.S_Cloacibacterium_normanense_nov_92_917 2.759430485515839 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_timonensis_nov_87_123 3.201141317876482 Supragingival 2.903770391988423 2.0207501480814806e-32 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_gingivalis_nov_93_483 3.4436936732182684 Positive_control 3.134700529414776 1.1588688953770649e-150 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Paracoccaceae.G_Rhodobacter.S_Rhodobacter_capsulatus_nov_92_841 2.7615986306091473 Subgingival_shallow_pockets 2.45301636398955 3.0417123475002053e-18 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_.S_Odoribacteraceae_G5__bacteriumHMT_505_nov_96_273 2.5531888850504076 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_oralis_nov_97_551 2.4314455157625563 Supragingival 2.1511822699553247 1.3987960511909506e-09 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae.G_Corynebacterium.S_Corynebacterium_matruchotii_nov_96_545 2.2746691486043877 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_oris_nov_96_832 2.2424632522532666 - K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mollicutes_O1_.F_Mollicutes_O1F1_.G_Mollicutes_O1F1G1_.S_Mollicutes_O1F1G1__bacteriumHMT_504_nov_97_723 2.5770491243835134 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio.S_Desulfovibrio_sp_HMT_040_nov_93_360 2.4704695748169057 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Veillonellaceae.G_Selenomonas.S_Selenomonas_sp__oral_taxon_137_nov_97_244 2.1865472218823236 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas.S_Porphyromonas_catoniae_nov_97_959 3.229663560963589 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Agrobacterium.S_Agrobacterium_tumefaciens_nov_97_912 2.518394641553811 Subgingival_shallow_pockets 2.18831651681953 7.643159381384864e-18 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium.S_Cardiobacterium_hominis_nov_97_732 2.321101419307214 Supragingival 2.021702937323071 2.6140826447057736e-08 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_denticola_nov_96_748 2.484106148921663 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia.S_Pseudoleptotrichia_goodfellowii_nov_96_146 2.3806480807981116 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Peptoanaerobacter.S_Peptoanaerobacter_yurii_nov_97_416 1.9337668566601072 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G3_.S_Odoribacteraceae_G3__bacteriumHMT_365_nov_96_748 2.11726288739006 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_gordonii_nov_97_633 2.1877753605999093 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_oris_nov_96_945 2.3051510448114665 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp_HMT_448_nov_96_627 2.1875634088537628 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_mucosa_nov_97_551 2.2858598411616304 Supragingival 2.0138266445570094 1.1436701443779275e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella.S_Prevotella_veroralis_nov_97_358 3.0827491070411805 Subgingival_deep_pockets 2.7945299781526445 5.1993733534845324e-06 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter.S_Acinetobacter_sp_HMT_408_nov_97_536 3.0528245812208303 Subgingival_shallow_pockets 2.762267839737747 7.207882533075973e-71 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_gingivalis_nov_97_699 2.887793289656317 Supragingival 2.5740621913396993 5.246767707021848e-11 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella.S_Segatella_oris_nov_97_149 2.772291895392484 Subgingival_deep_pockets 2.4529821314289464 2.2727799645915347e-07 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces.S_Actinomyces_sp__oral_taxon_175_nov_97_760 2.831598958219664 Supragingival 2.5430884563861165 5.871382545655182e-13 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotellaceae_multigenus.S_Prevotellaceae_multigenus_multispecies_spp1_2 2.4516943480824143 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_multispecies_spp10_2 2.363644872032037 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp12_2 2.8343195172267923 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotellaceae_multigenus.S_Prevotellaceae_multigenus_multispecies_spp13_2 2.6784496135517473 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter.S_Aggregatibacter_multispecies_spp14_2 2.6217640172436725 - K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_multispecies_spp24_2 3.0885159492586416 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae.G_Rothia.S_Rothia_multispecies_spp27_2 1.9774075540858058 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_multispecies_spp30_2 5.0318279976547515 Positive_control 4.560106551175303 8.688278692285752e-30 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella.S_Veillonella_multispecies_spp32_3 3.059893337361312 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp35_2 4.015466074258482 Subgingival_deep_pockets 3.7041306121043256 1.3127059677490948e-50 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiales_multifamily.G_Rhizobiales_multifamily_multigenus.S_Rhizobiales_multifamily_multigenus_multispecies_spp36_2 2.561373302231753 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga.S_Capnocytophaga_multispecies_spp4_2 2.5209909065052853 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp43_2 2.196596461948584 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp44_3 2.3713533078479063 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp45_2 2.7429024721720086 Supragingival 2.398351413776235 0.007503178888944509 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria.S_Neisseria_multispecies_spp54_2 3.0885925949757502 - K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_spp55_2 3.125473729709046 Subgingival_deep_pockets 2.806336626473559 6.102040997016846e-10 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium.S_Fusobacterium_multispecies_sppn4_2_nov_97_645 3.5161957005957283 Subgingival_shallow_pockets 3.2116156442149473 2.1124157378958073e-06 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus.S_Streptococcus_multispecies_sppn9_2_nov_97_787 2.351611667849496 - K_Bacteria 5.999999999999999 - K_Bacteria.P_Bacteroidota 5.505406428791605 Positive_control 4.885361990542386 5.167157322822669e-75 K_Bacteria.P_Bacteroidota.C_Bacteroidia 5.505394183484234 Positive_control 4.9748517584722185 1.0415064918771384e-88 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales 5.505394183484234 Positive_control 4.9748517584722185 1.0415064918771384e-88 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae 5.069009413594647 Subgingival_deep_pockets 4.567024432708637 1.5021351592881507e-63 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotella 4.729755953769159 Subgingival_deep_pockets 4.045384388570785 4.2581693411900146e-35 K_Bacteria.P_Fusobacteriota 5.425506714108571 Subgingival_shallow_pockets 4.923430354223427 1.5290310774327608e-38 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia 5.425506714108571 Subgingival_shallow_pockets 4.923430354223427 1.5290310774327608e-38 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales 5.421954142248615 Subgingival_shallow_pockets 4.917942329154129 3.8907288401014185e-37 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae 4.895546836056415 Supragingival 4.590936482583897 1.7255113504888481e-74 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Pseudoleptotrichia 4.441764982822807 Supragingival 4.134228191194323 1.470201812655359e-51 K_Bacteria.P_Bacillota 5.582975220458169 Positive_control 4.800495629799433 2.197821272487242e-24 K_Bacteria.P_Bacillota.C_Negativicutes 5.031880372610012 Positive_control 4.424344019285569 3.2577020168614904e-12 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales 5.031864433074872 Positive_control 4.43457756375463 1.9687569896675918e-13 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae 5.031864433074872 Positive_control 4.43457756375463 1.9687569896675918e-13 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Anaeroglobus 3.303979941887585 Subgingival_deep_pockets 3.0065378846760775 8.403556987634036e-31 K_Bacteria.P_Actinomycetota 5.284276838097719 Supragingival 4.946161471696115 1.3501142278649346e-167 K_Bacteria.P_Actinomycetota.C_Actinomycetes 5.257426376980539 Supragingival 4.9164356368262565 3.7082107251997304e-179 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales 4.706572202414742 Supragingival 4.404148179504836 1.677551502778623e-155 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae 4.706572202414742 Supragingival 4.404154885309323 1.677551502778623e-155 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Mycobacteriales.F_Corynebacteriaceae.G_Corynebacterium 4.706572202414742 Supragingival 4.404159299771384 1.677551502778623e-155 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Paludibacteraceae 4.208671508900342 Subgingival_deep_pockets 3.9062327302929343 1.405966791515757e-37 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Paludibacteraceae.G_Paludibacteraceae_G1_ 4.208671508900342 Subgingival_deep_pockets 3.906232700382571 1.405966791515757e-37 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Megasphaera 2.491267660955145 - K_Bacteria.P_Bacillota.C_Clostridia 4.650538499458779 Subgingival_deep_pockets 4.348128697711915 1.031065273510812e-89 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales 4.139716633950627 Subgingival_deep_pockets 3.8417845419644197 1.5260277849839678e-76 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae 3.888931635982765 Subgingival_deep_pockets 3.5905620348087606 4.4660532353324423e-38 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Peptoanaerobacter 3.421586628422758 Subgingival_shallow_pockets 3.113921244467885 1.8872297880043945e-12 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Segatella 4.39943702082179 Subgingival_deep_pockets 4.090660278208191 5.809993137179886e-73 K_Bacteria.P_Bacillota.C_Bacilli 5.439601444233915 Positive_control 4.890355061420157 1.7035517282653224e-55 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales 5.439590757742051 Positive_control 4.908058248361947 2.620805222639502e-54 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae 5.439584523833694 Positive_control 4.921324835811381 1.5542662040490751e-55 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Streptococcaceae.G_Streptococcus 5.439584523833694 Positive_control 4.921324835811382 1.5542662040490751e-55 K_Bacteria.P_Pseudomonadota 5.280467637589694 Negative_control 4.766752935700355 7.263262870575953e-42 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria 5.212834674760971 Negative_control 4.795391448036323 2.478935744233409e-56 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales 3.424561294610672 Supragingival 3.119714783376775 2.6209660766035024e-43 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae 3.424561294610672 Supragingival 3.12220466800977 2.6209660766035024e-43 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Cardiobacteriales.F_Cardiobacteriaceae.G_Cardiobacterium 3.424561294610672 Supragingival 3.1200629787265792 2.6209660766035024e-43 K_Bacteria.P_Spirochaetota 4.392528498229922 Subgingival_deep_pockets 4.093816331020078 2.862833925257551e-84 K_Bacteria.P_Spirochaetota.C_Spirochaetia 4.392528498229922 Subgingival_deep_pockets 4.093814459732058 2.862833925257551e-84 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales 4.392528498229922 Subgingival_deep_pockets 4.093816246106567 2.862833925257551e-84 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae 4.388041623235876 Subgingival_deep_pockets 4.088953481113846 2.79055632241332e-84 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Treponemataceae.G_Treponema 4.388041623235876 Subgingival_deep_pockets 4.088953493413087 2.79055632241332e-84 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales 4.091801185100564 Subgingival_deep_pockets 3.785288757759398 5.3411826232702805e-48 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae 4.091801185100564 Subgingival_deep_pockets 3.7852887454284687 5.3411826232702805e-48 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G3_ 3.2196532811026954 Supragingival 2.9140703143981965 5.808509620333008e-14 K_Bacteria.P_Synergistota 4.039644570721315 Subgingival_deep_pockets 3.7412661775724207 1.3060034652237134e-67 K_Bacteria.P_Synergistota.C_Synergistia 4.039644570721315 Subgingival_deep_pockets 3.741266200245536 1.3060034652237134e-67 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales 4.039644570721315 Subgingival_deep_pockets 3.741266239344399 1.3060034652237134e-67 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae 4.028753841748172 Subgingival_deep_pockets 3.729607290374584 7.548054191265108e-68 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Synergistaceae.G_Fretibacterium 4.028753841748172 Subgingival_deep_pockets 3.7296072779193823 7.548054191265108e-68 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria 4.691771629601086 Positive_control 4.257253845824555 3.459433948315927e-52 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales 4.691771629601086 Positive_control 4.2771818624699245 2.781382039715777e-54 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae 4.691771629601086 Positive_control 4.277181863040673 2.781382039715777e-54 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Neisseria 4.691716814719901 Positive_control 4.3004956704912205 9.393918774576077e-48 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales 3.9364034598431283 Subgingival_deep_pockets 3.6379325653882 1.9091144847903708e-36 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae 3.9230438558482015 Subgingival_deep_pockets 3.6251654090420877 3.297126860685631e-36 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Mitsuokella 2.455969045926042 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria 3.989545931154231 Subgingival_shallow_pockets 3.6856802615735385 2.1390222214830566e-156 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales 3.168125668332259 Subgingival_shallow_pockets 2.8741060629830373 4.746146146223561e-60 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Rhodobacteraceae 2.4867423294331767 Subgingival_shallow_pockets 2.1942470118744235 3.1111256328507545e-18 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Rhodobacteraceae.G_Paracoccus 2.4867423294331767 Subgingival_shallow_pockets 2.1979198359288836 3.1111256328507545e-18 K_Bacteria.P_Bacteroidota.C_Flavobacteriia 4.6030655255559045 Negative_control 4.3275655585824495 2.0137650211245222e-56 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales 4.6030655255559045 Negative_control 4.3186392324498835 2.0137650211245222e-56 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae 3.5060827960645446 Supragingival 3.2317317240193657 4.4352974940670563e-45 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Riemerella 3.3797167622505917 Supragingival 3.083966424270518 2.566067196581664e-38 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonas 3.884171338738074 Subgingival_deep_pockets 3.5863183251356863 1.3021771062497228e-33 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales 3.49598179636496 Subgingival_deep_pockets 3.1912302093326756 9.365755397682891e-24 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Ruminococcaceae 3.2834892492852035 - K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Ruminococcaceae.G_Ruminococcaceae_G1_ 3.23514504264382 - K_Bacteria.P_Bacillota.C_Bacilli.O_Caryophanales 4.072292960338419 Supragingival 3.7661401042886995 2.922196558694551e-50 K_Bacteria.P_Bacillota.C_Bacilli.O_Caryophanales.F_Gemellaceae 4.072292960338419 Supragingival 3.7661204411026934 2.922196558694551e-50 K_Bacteria.P_Bacillota.C_Bacilli.O_Caryophanales.F_Gemellaceae.G_Gemella 4.072292960338419 Supragingival 3.7661232531959645 2.922196558694551e-50 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Alloprevotella 4.279267819402503 Subgingival_deep_pockets 3.981845407729961 2.0011383962095196e-41 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hoylesella 4.261546160048938 Subgingival_deep_pockets 3.9572369597459773 5.1915278503558625e-50 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Leptotrichiaceae.G_Leptotrichia 4.707298021025568 Supragingival 4.404288328711942 3.8280481740507723e-50 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Aerococcaceae 3.441454906653617 Supragingival 3.1385541458486297 2.4719980238888326e-27 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Aerococcaceae.G_Abiotrophia 3.441454906653617 Supragingival 3.136440843067618 2.4719980238888326e-27 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae 4.573906046450325 Negative_control 4.272029100218304 9.315765316936432e-55 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Capnocytophaga 4.501789581080669 Supragingival 4.203059494285885 9.679303032549412e-66 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales 3.3199659190145323 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae 3.3199659190145323 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingomonas 3.1636544973990803 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales 4.755924087675916 Negative_control 4.408065131119808 4.5818440087884865e-39 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae 4.755924087675916 Negative_control 4.42013970580549 4.5818440087884865e-39 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae.G_Arachnia 3.7914516375772807 Supragingival 3.4864714173026568 2.848332862084637e-48 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales 4.375492755590675 Supragingival 4.07507828393422 1.675575488656683e-129 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae 4.375492755590675 Supragingival 4.075078295516051 1.675575488656683e-129 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 4.343733066122271 Supragingival 4.0433553692685456 5.881921550736843e-129 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales 3.2323465575513777 Subgingival_deep_pockets 2.96937872928793 7.635144418407785e-19 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales.F_Bifidobacteriaceae 3.2323465575513777 Subgingival_deep_pockets 2.9430920736514663 7.635144418407785e-19 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Bifidobacterium 2.9816796479747882 Subgingival_deep_pockets 2.711336359099316 1.9587470754486106e-09 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae 5.328672860979677 Subgingival_deep_pockets 4.80473435026885 2.6151726064524863e-61 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteriales.F_Fusobacteriaceae.G_Fusobacterium 5.328672860979677 Subgingival_deep_pockets 4.80473435026885 2.6151726064524863e-61 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Flavobacteriaceae.G_Chryseobacterium 4.473254377239028 Negative_control 4.150871047883006 2.411023365813111e-15 K_Bacteria.P_Chloroflexota 2.785340806877996 Subgingival_deep_pockets 2.491349951855282 3.3221324605436316e-22 K_Bacteria.P_Chloroflexota.C_Anaerolineae 2.785340806877996 Subgingival_deep_pockets 2.491292035524417 3.3221324605436316e-22 K_Bacteria.P_Chloroflexota.C_Anaerolineae.O_Anaerolineales 2.785340806877996 Subgingival_deep_pockets 2.5006181698972925 3.3221324605436316e-22 K_Bacteria.P_Chloroflexota.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae 2.785340806877996 Subgingival_deep_pockets 2.4974470146666743 3.3221324605436316e-22 K_Bacteria.P_Chloroflexota.C_Anaerolineae.O_Anaerolineales.F_Anaerolineaceae.G_Anaerolineae_G1_ 2.785340806877996 Subgingival_deep_pockets 2.4873688371989124 3.3221324605436316e-22 K_Bacteria.P_Patescibacteria 4.518645735315714 Subgingival_deep_pockets 4.214346586708456 8.061255056598405e-41 K_Bacteria.P_Patescibacteria.C_Saccharimonadia 4.501364266062923 Subgingival_deep_pockets 4.19554103627296 9.38586949318964e-44 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales 4.501364266062923 Subgingival_deep_pockets 4.195535377262348 9.38586949318964e-44 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F3_ 2.272107908331017 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F3_.G_Saccharimonadales_F3G1_ 2.272107908331017 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales 5.011538687544034 Positive_control 4.647200401984606 1.7237592895441488e-47 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae 5.011538687544034 Positive_control 4.647200401828839 1.7237592895441488e-47 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Aggregatibacter 5.011538687544034 Positive_control 4.681094560569344 1.3702838817069212e-46 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae 4.2222147579830285 Subgingival_deep_pockets 3.771287719136945 1.5230493003943338e-34 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Tannerellaceae.G_Tannerella 4.2222147579830285 Subgingival_deep_pockets 3.7660031424592844 1.5230493003943338e-34 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosyncoccaceae 3.834184681182729 Negative_control 3.4861403919185787 1.8647920065506e-09 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosyncoccaceae.G_Nanosyncoccus 3.834184681182729 Negative_control 3.48356470984851 1.8647920065506e-09 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Hallella 2.8267312123993484 Subgingival_deep_pockets 2.5162135419423657 1.9011068142911823e-19 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae 5.4275743833028045 Positive_control 5.03561186146532 1.2702134109435975e-45 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Porphyromonadaceae.G_Porphyromonas 5.4275743833028045 Positive_control 5.03561186146532 1.2702134109435975e-45 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Bifidobacteriales.F_Bifidobacteriaceae.G_Scardovia 2.8743375005056047 Subgingival_deep_pockets 2.5894320710987695 3.4537258092306608e-12 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae 4.197363838730673 Supragingival 3.899064806676314 2.4816210374143837e-37 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadaceae.G_Saccharimonas 4.197363838730673 Supragingival 3.899076755241712 2.4816210374143837e-37 K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Selenomonadaceae.G_Selenomonadaceae_G1_ 2.634893042871541 Subgingival_deep_pockets 2.3444042800232037 3.583618063860184e-15 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae 3.7640803987988134 Subgingival_shallow_pockets 3.462977528163274 1.5903032090396358e-34 K_Bacteria.P_Bacillota.C_Bacilli.O_Lactobacillales.F_Carnobacteriaceae.G_Granulicatella 3.7640803987988134 Subgingival_shallow_pockets 3.462994285383656 1.5903032090396358e-34 K_Bacteria.P_Actinomycetota.C_Actinobacteria 4.027014542091856 Supragingival 3.7327619941972334 6.793090494745396e-67 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales 3.820223006349108 Subgingival_shallow_pockets 3.5059338344065045 4.1670746797507324e-70 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Micrococcaceae 3.2981772871956756 Subgingival_shallow_pockets 2.988580862731775 1.4240742379762952e-43 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Micrococcaceae.G_Micrococcus 3.2981772871956756 Subgingival_shallow_pockets 2.994357181399256 1.4240742379762952e-43 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Peptococcaceae 2.820469054059302 Subgingival_deep_pockets 2.513855671743654 8.630052761963293e-22 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Peptococcaceae.G_Peptococcus 2.820469054059302 Subgingival_deep_pockets 2.5179588382822207 8.630052761963293e-22 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Stomatobaculum 2.565636855026934 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales 5.165138201813312 Negative_control 4.816734252172243 7.913455166543365e-297 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae 4.703228670465212 - K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Acinetobacter 4.668726988192671 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Veillonella 5.031864433074872 Positive_control 4.45302705271083 4.879347165068991e-20 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G2_ 2.334180064160175 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Schaalia 2.9073446455593874 Supragingival 2.612358343210581 7.775327555228756e-10 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales 4.9988588767428555 Supragingival 4.623171098211005 4.913644610928274e-79 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae 4.9988588767428555 Supragingival 4.623171098810436 4.913644610928274e-79 K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Micrococcales.F_Micrococcaceae.G_Rothia 4.9988588767428555 Supragingival 4.623171098245928 4.913644610928274e-79 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Moraxellaceae.G_Moraxella 3.6750770180452057 Subgingival_shallow_pockets 3.356600354208504 1.46325064984847e-90 K_Bacteria.P_Bacillota.C_Negativicutes.O_Veillonellales.F_Veillonellaceae.G_Dialister 4.05708520157473 Subgingival_deep_pockets 3.752913162113335 4.5868712539909104e-89 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales 3.144419719139921 Subgingival_shallow_pockets 2.830628490228795 2.7527560475419416e-65 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae 3.0401936383627506 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Agrobacterium 2.945969127688235 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae 3.668117663493555 Subgingival_deep_pockets 3.370540811034579 5.901421771937883e-78 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G5_ 2.4717461463337007 Subgingival_deep_pockets 2.169901388446829 1.2123634701959288e-12 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Oribacterium 3.4019488964910654 Subgingival_deep_pockets 3.0936932364807457 4.600953421490047e-24 K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales 3.0217207788321505 Subgingival_shallow_pockets 2.710647270676936 6.719409144183914e-17 K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIVa_ 2.772849972366255 - K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Lachnospiraceae__XIVa_.G_Lachnospiraceae__G_ 2.772849972366255 - K_Bacteria.P_Bacillota.C_Erysipelotrichia 3.292542234289987 Subgingival_deep_pockets 2.9867610410884056 5.495093034366751e-29 K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales 3.292542234289987 Subgingival_deep_pockets 2.988957357359517 5.495093034366751e-29 K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae 3.292542234289987 Subgingival_deep_pockets 2.991827307785052 5.495093034366751e-29 K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Solobacterium 3.1842785388446257 Subgingival_deep_pockets 2.879742380784911 3.548517321639916e-20 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pasteurellales.F_Pasteurellaceae.G_Haemophilus 4.163788912238686 Supragingival 3.861469584784577 6.674863662511376e-30 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnoanaerobaculum 3.45997197260781 Supragingival 3.1525989425010486 3.88132227774816e-18 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Kingella 3.5285764147048253 Supragingival 3.2335085301376987 5.505132059099004e-38 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria 4.150175771337211 Subgingival_shallow_pockets 3.8464195098615575 6.077197748152876e-65 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales 4.150175771337211 Subgingival_shallow_pockets 3.8464187117885595 6.077197748152876e-65 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae 4.150175771337211 Subgingival_shallow_pockets 3.8464187401300953 6.077197748152876e-65 K_Bacteria.P_Pseudomonadota.C_Epsilonproteobacteria.O_Campylobacterales.F_Campylobacteraceae.G_Campylobacter 4.150175771337211 Subgingival_shallow_pockets 3.8464190001827157 6.077197748152876e-65 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae 3.695079500872363 Subgingival_deep_pockets 3.3990037697116886 4.2034863913545646e-38 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G5_ 3.481883885963748 Subgingival_deep_pockets 3.1810070400796144 7.564268194229863e-21 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales 4.158545464251544 Subgingival_deep_pockets 3.856716561194094 8.419930176671659e-75 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae 4.158545464251544 Subgingival_deep_pockets 3.85671661054491 8.419930176671659e-75 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Parvimonas 4.147629491439411 Subgingival_deep_pockets 3.8458181501975015 1.0432831954178615e-72 K_Bacteria.P_Bacillota.C_Clostridia.O_Tissierellales.F_Peptoniphilaceae.G_Peptoniphilaceae_G1_ 2.553377043995909 Subgingival_deep_pockets 2.244226384568734 7.540568534629223e-11 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanoperiomorbaceae 4.0992594730132375 Subgingival_deep_pockets 3.797217997220079 4.1556399728583835e-29 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanoperiomorbaceae.G_Nanoperiomorbus 4.0992594730132375 Subgingival_deep_pockets 3.7928677866977356 4.1556399728583835e-29 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Parvisynbacteraceae 3.727692686880749 Supragingival 3.4241575967880182 1.1665216322730912e-11 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Parvisynbacteraceae.G_Parvisynbacter 3.727692686880749 Supragingival 3.4265003108356176 1.1665216322730912e-11 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G1_ 3.3938068000780435 Subgingival_deep_pockets 3.1644999486898633 3.1558186931357365e-39 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Gallibacter 3.1910922257424827 Subgingival_deep_pockets 2.8992246814806695 3.5674704904302607e-47 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Filifactoraceae.G_Filifactor 3.7844953692998495 Subgingival_deep_pockets 3.48740319231484 4.181663421745102e-44 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Corynebacteriales 2.9991420242214626 Supragingival 2.6928113661329727 2.597286340682361e-29 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Corynebacteriales.F_Corynebacteriaceae 2.9991420242214626 Supragingival 2.6904348554015636 2.597286340682361e-29 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Corynebacteriales.F_Corynebacteriaceae.G_Corynebacterium 2.9991420242214626 Supragingival 2.6949991738358663 2.597286340682361e-29 K_Bacteria.P_Bacillota.C_Bacilli.O_Bacillales 3.1498555505491592 - K_Bacteria.P_Bacillota.C_Bacilli.O_Bacillales.F__Exiguobacteraceae_ 3.1498555505491592 - K_Bacteria.P_Bacillota.C_Bacilli.O_Bacillales.F__Exiguobacteraceae_.G_Exiguobacterium 3.1498555505491592 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Johnsonella 3.15982337079912 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiaceae.G_Rhizobium 2.352249001113291 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Propionibacteriales.F_Propionibacteriaceae.G_Cutibacterium 4.75034416109801 Negative_control 4.4293862587480675 1.8006839533564214e-42 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales 3.6817643907013227 Subgingival_shallow_pockets 3.385361510546821 3.1469102908193866e-92 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae 3.6817643907013227 Subgingival_shallow_pockets 3.375988032203035 3.1469102908193866e-92 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Brevundimonas 3.5092534990419786 Subgingival_shallow_pockets 3.2058458760400756 1.5366354698791382e-72 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales 3.657893965624095 Supragingival 3.36320354533687 6.855994585107637e-25 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae 3.618139040482681 Supragingival 3.3213381323154003 3.4306953946526043e-31 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Burkholderiaceae.G_Lautropia 3.618139040482681 Supragingival 3.3211552489590077 3.4306953946526043e-31 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae 2.8468693145044477 Subgingival_shallow_pockets 2.5472827780626472 1.8762385289131474e-08 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Ottowia 2.648680218459109 - K_Bacteria.P_Actinomycetota.C_Coriobacteriia 3.489852127274868 Subgingival_deep_pockets 3.1950446181633723 1.9403753715503847e-37 K_Bacteria.P_Actinomycetota.C_Coriobacteriia.O_Coriobacteriales 3.489852127274868 Subgingival_deep_pockets 3.1921315880996453 1.9403753715503847e-37 K_Bacteria.P_Actinomycetota.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae 3.489852127274868 Subgingival_deep_pockets 3.1984260854586415 1.9403753715503847e-37 K_Bacteria.P_Actinomycetota.C_Coriobacteriia.O_Coriobacteriales.F_Atopobiaceae.G_Lancefieldella 3.489852127274868 Subgingival_deep_pockets 3.1922783019586265 1.9403753715503847e-37 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Shuttleworthia 2.482407199108668 Subgingival_deep_pockets 2.1946367697704967 1.523263827363453e-14 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae 3.0022346498177557 Subgingival_deep_pockets 2.7042197808745034 1.240487971534175e-16 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Phocaeicola 2.896983629751786 Subgingival_deep_pockets 2.5981752188570466 5.551598360335177e-15 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacteraceae_G3_ 3.1305512421609065 Subgingival_deep_pockets 2.846979536935104 1.880371722633588e-31 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanogingivalaceae 2.677326058872537 - K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanogingivalaceae.G_Nanogingivalis 2.677326058872537 - K_Bacteria.P_Actinomycetota.C_Actinomycetes.O_Actinomycetales.F_Actinomycetaceae.G_Peptidiphaga 2.937669346115496 Supragingival 2.632359973355132 1.4875233103925324e-15 K_Bacteria.P_Mycoplasmatota 3.1976647167623273 Subgingival_deep_pockets 2.896559176865663 1.5632662586747585e-27 K_Bacteria.P_Mycoplasmatota.C_Mollicutes 3.1976647167623273 Subgingival_deep_pockets 2.8986046050612786 1.5632662586747585e-27 K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mycoplasmoidales 3.091099230200478 Subgingival_deep_pockets 2.7837298916846125 2.276873232403017e-27 K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mycoplasmoidales.F_Metamycoplasmataceae 3.091099230200478 Subgingival_deep_pockets 2.7851751685470383 2.276873232403017e-27 K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mycoplasmoidales.F_Metamycoplasmataceae.G_Metamycoplasma 3.091099230200478 Subgingival_deep_pockets 2.7829419103737862 2.276873232403017e-27 K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_ 3.601360907064255 Negative_control 3.314181271422302 2.2661751288286122e-07 K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales 3.601360907064255 Negative_control 3.306988853102594 2.2661751288286122e-07 K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales.F_Absconditicoccaceae 3.601360907064255 Negative_control 3.3062673501501587 2.2661751288286122e-07 K_Bacteria.P_Patescibacteria.C_Patescibacteria_C1_.O_Absconditabacterales.F_Absconditicoccaceae.G_Absconditicoccaceae_G1_ 3.601360907064255 Negative_control 3.319558985093855 2.2661751288286122e-07 K_Bacteria.P_Deinococcota 2.9665918091460775 Subgingival_shallow_pockets 2.7069673227863493 7.070817440132991e-18 K_Bacteria.P_Deinococcota.C_Deinococci 2.9665918091460775 Subgingival_shallow_pockets 2.696151397340218 7.070817440132991e-18 K_Bacteria.P_Deinococcota.C_Deinococci.O_Deinococcales 2.9665918091460775 Subgingival_shallow_pockets 2.70882267669842 7.070817440132991e-18 K_Bacteria.P_Deinococcota.C_Deinococci.O_Deinococcales.F_Deinococcaceae 2.9665918091460775 Subgingival_shallow_pockets 2.7118827143513813 7.070817440132991e-18 K_Bacteria.P_Deinococcota.C_Deinococci.O_Deinococcales.F_Deinococcaceae.G_Deinococcus 2.9665918091460775 Subgingival_shallow_pockets 2.7090348337501906 7.070817440132991e-18 K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Burkholderiales.F_Comamonadaceae.G_Delftia 2.617776499234112 - K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Peptostreptococcaceae 3.144361661624851 Subgingival_deep_pockets 2.850486606284672 7.043402631941228e-21 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Peptostreptococcaceae.G_Peptostreptococcus 3.144361661624851 Subgingival_deep_pockets 2.847294770969395 7.043402631941228e-21 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Clostridiales_F1_ 2.7410850507245477 Subgingival_deep_pockets 2.436059902219104 1.3004207251087807e-17 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Clostridiales_F1_.G_Clostridiales_F1G1_ 2.7410850507245477 Subgingival_deep_pockets 2.4405982489494695 1.3004207251087807e-17 K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria 2.6475943689917263 Subgingival_deep_pockets 2.370436360592112 1.485226018739553e-06 K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfobacterales 2.293187921422357 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae 2.293187921422357 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfobacterales.F_Desulfobulbaceae.G_Desulfobulbus 2.293187921422357 - K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Erysipelotrichaceae_G1_ 2.2173482787833265 9.47992832260694e-10 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Microbacteriaceae 3.6286714635002992 Subgingival_shallow_pockets 3.3187940193078656 5.189533286872219e-24 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Microbacteriaceae.G_Microbacterium 3.6286714635002992 Subgingival_shallow_pockets 3.302774732412828 5.189533286872219e-24 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteria__O_ 3.3426586337994193 Subgingival_deep_pockets 3.0475132727676764 0.006134610024269677 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteria__O_.F_Fusobacteria__F_ 3.3426586337994193 Subgingival_deep_pockets 3.0582938231086976 0.006134610024269677 K_Bacteria.P_Fusobacteriota.C_Fusobacteriia.O_Fusobacteria__O_.F_Fusobacteria__F_.G_Fusobacteria__G_1_ 3.3426586337994193 Subgingival_deep_pockets 3.0651187893858003 0.006134610024269677 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales 3.979714120454213 Supragingival 3.687137197101597 8.116788413906e-109 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae 3.979714120454213 Supragingival 3.6871371602373957 8.116788413906e-109 K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Actinomycetales.F_Actinomycetaceae.G_Actinomyces 3.979714120454213 Supragingival 3.6871372084113316 8.116788413906e-109 K_Bacteria.P_Bacillota.C_Erysipelotrichia.O_Erysipelotrichales.F_Erysipelotrichaceae.G_Bulleidia 2.427806261393596 Subgingival_deep_pockets 2.1386800162805932 1.4554355416944863e-06 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Sphingomonadales.F_Sphingomonadaceae.G_Sphingobium 2.800358237002844 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Bacteroidaceae.G_Bacteroides 2.3351134359096406 - K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Weeksellaceae_G1_ 2.9063239503099116 Supragingival 2.6031487819137324 3.871676617688817e-10 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae 4.981236496367434 Negative_control 4.613403726380594 6.587583209658941e-110 K_Bacteria.P_Pseudomonadota.C_Gammaproteobacteria.O_Pseudomonadales.F_Pseudomonadaceae.G_Pseudomonas 4.981236496367434 Negative_control 4.621477143738445 6.587583209658941e-110 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Spirochaetaceae 2.4044466510212033 Subgingival_deep_pockets 2.1417546505233886 3.56297015315154e-06 K_Bacteria.P_Spirochaetota.C_Spirochaetia.O_Spirochaetales.F_Spirochaetaceae.G_Treponema 2.4044466510212033 Subgingival_deep_pockets 2.1468416176523695 3.56297015315154e-06 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F1_ 2.7510610585872466 Subgingival_shallow_pockets 2.4567756157174867 0.0017180217823070615 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Saccharimonadales_F1_.G_Saccharimonadales_F1G1_ 2.7510610585872466 Subgingival_shallow_pockets 2.46566276831253 0.0017180217823070615 K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Odoribacteraceae.G_Odoribacter 2.75713219973411 Subgingival_deep_pockets 2.471332162520728 1.573457475360525e-05 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosynbacteraceae 3.4107375196756164 Supragingival 3.1095470470817848 1.627310312336376e-09 K_Bacteria.P_Patescibacteria.C_Saccharimonadia.O_Saccharimonadales.F_Nanosynbacteraceae.G_Nanosynbacter 3.4107375196756164 Supragingival 3.1095573749569914 1.627310312336376e-09 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Caulobacterales.F_Caulobacteraceae.G_Asticcacaulis 3.197392614896544 - K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Intrasporangiaceae 2.6013388439847223 - K_Bacteria.P_Actinomycetota.C_Actinobacteria.O_Micrococcales.F_Intrasporangiaceae.G_Janibacter 2.6013388439847223 - K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_ 2.8537177213214453 Subgingival_deep_pockets 2.5519946979357826 5.041915691647211e-27 K_Bacteria.P_Bacillota.C_Clostridia.O_Clostridiales.F_Peptostreptococcaceae__XI_.G_Peptostreptococcaceae__XI__G_4_ 2.8537177213214453 Subgingival_deep_pockets 2.549386723577463 5.041915691647211e-27 K_Bacteria.P_Bacillota.C_Clostridia.O_Peptostreptococcales.F_Anaerovoracaceae.G_Anaerovoracaceae_G4_ 2.52084460733344 Subgingival_deep_pockets 2.2509511635689137 1.6529044044618377e-12 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Butyrivibrio 2.5070101208154365 Subgingival_deep_pockets 2.192250139883674 0.001142569190597068 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Catonella 3.614388383696946 Subgingival_deep_pockets 3.3124443320735284 7.939727186588482e-35 K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Dethiosulfovibrionaceae 2.433483224565533 - K_Bacteria.P_Synergistota.C_Synergistia.O_Synergistales.F_Dethiosulfovibrionaceae.G_Pyramidobacter 2.433483224565533 - K_Bacteria.P_Pseudomonadota.C_Betaproteobacteria.O_Neisseriales.F_Neisseriaceae.G_Eikenella 3.083350902233328 Supragingival 2.7832303575190416 1.0111077567076172e-09 K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Moryella 2.6209093232894523 Negative_control 2.3199387548058583 0.006749227740004325 K_Bacteria.P_Bacillota.C_Clostridia.O_Eubacteriales.F_Ruminococcaceae.G_Ruminococcaceae_G2_ 2.3061014788932477 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Veillonellaceae 2.6566207990174613 - K_Bacteria.P_Bacillota.C_Negativicutes.O_Selenomonadales.F_Veillonellaceae.G_Selenomonas 2.6566207990174613 - K_Bacteria.P_Bacillota.C_Clostridia.O_Lachnospirales.F_Lachnospiraceae.G_Lachnospiraceae_G8_ 2.563599643640971 Subgingival_deep_pockets 2.2685684204712633 1.362127810849292e-15 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Paracoccaceae 3.0667054149847064 Subgingival_shallow_pockets 2.777827831758718 3.013245447204994e-48 K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhodobacterales.F_Paracoccaceae.G_Rhodobacter 3.0667054149847064 Subgingival_shallow_pockets 2.7725525779299174 3.013245447204994e-48 K_Bacteria.P_Bacteroidota.C_Flavobacteriia.O_Flavobacteriales.F_Weeksellaceae.G_Cloacibacterium 2.759430485515839 - K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mollicutes_O1_ 2.5770491243835134 - K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mollicutes_O1_.F_Mollicutes_O1F1_ 2.5770491243835134 - K_Bacteria.P_Mycoplasmatota.C_Mollicutes.O_Mollicutes_O1_.F_Mollicutes_O1F1_.G_Mollicutes_O1F1G1_ 2.5770491243835134 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfovibrionales 2.4704695748169057 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae 2.4704695748169057 - K_Bacteria.P_Pseudomonadota.C_Deltaproteobacteria.O_Desulfovibrionales.F_Desulfovibrionaceae.G_Desulfovibrio 2.4704695748169057 - K_Bacteria.P_Bacteroidota.C_Bacteroidia.O_Bacteroidales.F_Prevotellaceae.G_Prevotellaceae_multigenus 2.88073614257977 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiales_multifamily 2.561373302231753 - K_Bacteria.P_Pseudomonadota.C_Alphaproteobacteria.O_Rhizobiales.F_Rhizobiales_multifamily.G_Rhizobiales_multifamily_multigenus 2.561373302231753 -