ANCOM Volcano Plot


ANCOM statistical results

W
Porphyromonas pasteri (SP34) 413
Campylobacter concisus (SP45) 404
Prevotella melaninogenica (SP120) 400
Klebsiella pneumoniae (SP63) 399
Aggregatibacter segnis (SP111) 398
Salmonella enterica (SP178) 397
Neisseria elongata (SP145) 397
Citrobacter koseri (SP26) 397
Campylobacter concisus_nov_96.963% (SPN15) 395
Veillonella parvula (SP2) 392
Veillonella tobetsuensis (SP107) 392
Veillonella rogosae (SP90) 391
Veillonella multispecies_spp6_3 (SPP6) 391
Aggregatibacter sp. HMT513 (SP252) 391
Veillonella multispecies_spp25_2 (SPP25) 391
Neisseria mucosa (SP346) 391
Fusobacterium periodonticum (SP130) 390
Veillonella dispar (SP3) 389
Haemophilus sputorum (SP371) 388
Veillonella atypica (SP35) 386
Cutibacterium acnes (SP222) 386
Haemophilus sp. HMT036 (SP188) 384
Eikenella corrodens (SP104) 384
Haemophilus haemolyticus (SP163) 382
Haemophilus parainfluenzae (SP14) 382
Aggregatibacter aphrophilus (SP84) 379
Alloprevotella sp. HMT473 (SP181) 379
Aggregatibacter sp. HMT458 (SP136) 379
Neisseria perflava (SP94) 378
Campylobacter showae (SP265) 373
Gemella sanguinis (SP285) 371
Fusobacterium nucleatum (SP56) 368
Neisseria sp. HMT020 nov_94.070% (SPN248) 366
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 360
Porphyromonas catoniae (SP15) 353
Neisseria flava (SP53) 352
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Baseline Baseline Baseline Baseline Final H +PMA Final H +PMA Final H +PMA Final H +PMA Final H +PMA
Porphyromonas pasteri (SP34) 262.0 583.00 1057.0 2492.25 6973.0 1.0 1.00 1.0 1.75 62.0
Campylobacter concisus (SP45) 100.0 250.50 1074.5 2793.75 4310.0 1.0 1.00 1.0 1.00 47.0
Prevotella melaninogenica (SP120) 64.0 210.25 376.0 637.25 1229.0 1.0 1.00 1.0 1.00 497.0
Klebsiella pneumoniae (SP63) 1.0 7.00 35.5 239.75 1996.0 1.0 91.75 1986.0 5677.50 68814.0
Aggregatibacter segnis (SP111) 164.0 298.00 521.5 671.75 2236.0 1.0 1.00 1.0 7.00 224.0
Salmonella enterica (SP178) 1.0 1.00 1.0 1.00 1771.0 1.0 1.00 32.5 6151.50 11349.0
Neisseria elongata (SP145) 35.0 204.50 829.0 1804.25 4223.0 1.0 1.00 1.0 8.00 128.0
Citrobacter koseri (SP26) 1.0 1.00 1.0 38.75 10239.0 1.0 1.00 1673.5 32628.00 58393.0
Campylobacter concisus_nov_96.963% (SPN15) 6.0 44.00 300.0 736.25 1159.0 1.0 1.00 1.0 1.00 6.0
Veillonella parvula (SP2) 559.0 864.25 1259.5 1920.75 3042.0 1.0 1.00 5.0 30.50 4232.0
Veillonella tobetsuensis (SP107) 76.0 115.75 135.0 212.75 588.0 1.0 1.00 1.0 2.50 114.0
Veillonella rogosae (SP90) 344.0 1300.00 2825.0 3680.25 10720.0 1.0 1.00 20.0 136.25 4106.0
Veillonella multispecies_spp6_3 (SPP6) 126.0 340.00 467.0 588.75 1607.0 1.0 1.00 1.0 29.75 204.0
Aggregatibacter sp. HMT513 (SP252) 1.0 80.00 139.5 182.25 393.0 1.0 1.00 1.0 1.00 25.0
Veillonella multispecies_spp25_2 (SPP25) 1955.0 3375.00 5267.0 9121.75 14514.0 1.0 1.00 73.0 420.00 4989.0
Neisseria mucosa (SP346) 1.0 350.50 695.5 1412.00 4662.0 1.0 1.00 1.0 15.50 742.0
Fusobacterium periodonticum (SP130) 14.0 151.25 661.0 2033.25 6726.0 1.0 1.00 2.5 22.25 268.0
Veillonella dispar (SP3) 68.0 246.50 389.5 565.25 1607.0 1.0 1.00 1.0 5.75 1613.0
Haemophilus sputorum (SP371) 1.0 42.75 152.5 430.50 1717.0 1.0 1.00 1.0 1.00 4.0
Veillonella atypica (SP35) 39.0 523.00 974.0 2635.50 5770.0 1.0 1.00 6.0 85.25 1554.0
Cutibacterium acnes (SP222) 1.0 1.00 1.0 1.00 13.0 1.0 1.00 1.0 18.25 136.0
Haemophilus sp. HMT036 (SP188) 1.0 21.75 69.5 160.50 413.0 1.0 1.00 1.0 1.00 8.0
Eikenella corrodens (SP104) 93.0 179.25 228.0 378.75 778.0 1.0 1.00 5.0 24.25 223.0
Haemophilus haemolyticus (SP163) 1.0 13.00 36.0 82.25 276.0 1.0 1.00 1.0 1.00 15.0
Haemophilus parainfluenzae (SP14) 5256.0 9419.00 11578.5 15599.75 27948.0 1.0 8.25 157.5 1673.75 7495.0
Aggregatibacter aphrophilus (SP84) 1.0 66.50 139.0 325.50 1695.0 1.0 1.00 1.0 1.00 99.0
Alloprevotella sp. HMT473 (SP181) 1.0 16.00 51.0 95.25 302.0 1.0 1.00 1.0 1.00 3.0
Aggregatibacter sp. HMT458 (SP136) 12.0 32.00 54.0 100.25 444.0 1.0 1.00 1.0 1.00 137.0
Neisseria perflava (SP94) 597.0 1052.25 1900.5 3494.75 9141.0 1.0 1.00 51.0 300.00 13856.0
Campylobacter showae (SP265) 1.0 16.75 67.0 210.00 345.0 1.0 1.00 1.0 1.00 4.0
Gemella sanguinis (SP285) 1.0 13.75 105.5 421.50 721.0 1.0 1.00 1.0 2.00 73.0
Fusobacterium nucleatum (SP56) 1.0 13.50 40.0 108.25 601.0 1.0 1.00 1.0 1.00 48.0
Neisseria sp. HMT020 nov_94.070% (SPN248) 1.0 9.25 20.0 78.25 699.0 1.0 1.00 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP75) 1.0 4.00 36.5 79.25 234.0 1.0 1.00 1.0 1.00 16.0
Porphyromonas catoniae (SP15) 1.0 3.00 21.0 81.00 368.0 1.0 1.00 1.0 1.00 1.0
Neisseria flava (SP53) 1555.0 3284.75 4634.0 9581.00 25086.0 1.0 9.25 264.5 2912.00 27529.0
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